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Report for CCDS22347.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22347.1 Public Mus musculus 8 Zfp868 23 108 98 CCDS HistoryNCBI Gene:234362Re-query CCDS DB by CCDS ID:22347.1Re-query CCDS DB by GeneID:234362See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22347.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074982.6 ENSMUSP00000074510.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074982.6Link to Ensembl Protein Viewer:ENSMUSP00000074510.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000074982Re-query CCDS DB by Protein ID:ENSMUSP00000074510
Original member Current member EBI ENSMUST00000121886.7 ENSMUSP00000113952.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000121886.7Link to Ensembl Protein Viewer:ENSMUSP00000113952.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000121886Re-query CCDS DB by Protein ID:ENSMUSP00000113952
Original member NCBI NM_001045553.1 NP_001039018.1 Updated not alive Link to Nucleotide Sequence:NM_001045553.1Link to Protein Sequence:NP_001039018.1Re-query CCDS DB by Nucleotide ID:NM_001045553Re-query CCDS DB by Protein ID:NP_001039018
Current member NCBI NM_001045553.2 NP_001039018.1 Accepted alive Link to Nucleotide Sequence:NM_001045553.2Link to Protein Sequence:NP_001039018.1Re-query CCDS DB by Nucleotide ID:NM_001045553Re-query CCDS DB by Protein ID:NP_001039018Link to BLAST:NP_001039018.1
Original member NCBI NM_172754.2 NP_766342.2 Updated not alive Link to Nucleotide Sequence:NM_172754.2Link to Protein Sequence:NP_766342.2Re-query CCDS DB by Nucleotide ID:NM_172754Re-query CCDS DB by Protein ID:NP_766342
Current member NCBI NM_172754.3 NP_766342.2 Accepted alive Link to Nucleotide Sequence:NM_172754.3Link to Protein Sequence:NP_766342.2Re-query CCDS DB by Nucleotide ID:NM_172754Re-query CCDS DB by Protein ID:NP_766342Link to BLAST:NP_766342.2

Chromosomal Locations for CCDS 22347.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 69611414 69612455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 69613394 69613454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 69613748 69613874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 69619314 69619352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1269 nt):
ATGGAGACAGCCATTGTTGGACTCTCCAGGCCTGATCAGGGTTTGGTGAGCTTTGAGGATCTGGTGGTGC
ACTTCACCCAGGATGAGTGGGATTTGCTGGCTCCTTCCCAGAAGACTCTCTACGGAGATGTGATGCTGGA
GACCTTCAGGAACTTCACTGATACAGGATGTGAATGGGAAGACCAGAAAATTGAAGACCATTTTGAAGAG
CCTGAAATAAATCTAAGGAACATCGTCACTCACTCTGAATACACACAGTATGAACACGAGGAATATGAAG
AGAAGCCACCTGATTCTAATTTTCTCACAAGTGTTGAAGGCTACATGGAAACTCACACTGTGAATGGGCC
TTCTGAGTGTGAGGTATGTTTAAAATCCTATGGACTATACCACCTAACTTACAATGGCCATCACAACTAT
GAGTACAAAGAGTGTGTAGGAAGCCAACCTGTACGAAAAAGTTATGAATGTAACCAGTGTGGTAAAACTC
TGAGTTCTTACAATTCTCTTCAAAGACATCAGAAAATTCATATTGAAGAAAGACCGTATAAATGTCAACA
GTGTACTAAGGCCTTCAGATGTCTCAACGCCCTTCAATCACATGAAAGAATTCATACTGGAGAGAAACCT
TATGAATGTAAGCACTGTGGTACAGCTTTTAGCAGACTTACTCACTTGCGATTACATGAGAAAGTTCATA
CTGGAGAAAAACACTATGAATGTAAACAATGTAATATCGTTTTTAAATCTCAGAGTTCCTATCATAGACA
TAAGATAATGCATGGAGAGACATTCTATAATTGTAAAGAGTGTGGTAAGTCCTTCATTTATCCCTCTTTA
CTTCAAATGCATGAAAGAACTCACACAGGTGAAAAACCCTATGAATGTAAACTATGTGGTAAGACTTTTA
GATATCATTCTTCCATTCGATTACATGAAAGAACTCATACGGGAGAAAAACCCTATGAATGTAAACACTG
TGGAAAAGCCTTTACACGTCAGAGTTATCTTCAGTTTCATGAGCGAAGCCACACTGGAGAGAAACCCTAT
GAATGTAAAGAATGTGGTAAAGCCTTTAGACATCACTCCTACCTTCGGTTACATGAAAGAAGACATACTG
GGGAGAAGCCGTACCAGTGCGGACAGTGTGGCAGATCCTTCAGCCGGCAGAGTTCCTTTAAGAGACATCA
GTCAGTTCATGCTGTGGAAAACCCCTATAAATGTCAACAATATCTGATTCCTTTATCTCTGTTTCCTTCA
AATGCATGA

Translation (422 aa):
METAIVGLSRPDQGLVSFEDLVVHFTQDEWDLLAPSQKTLYGDVMLETFRNFTDTGCEWEDQKIEDHFEE
PEINLRNIVTHSEYTQYEHEEYEEKPPDSNFLTSVEGYMETHTVNGPSECEVCLKSYGLYHLTYNGHHNY
EYKECVGSQPVRKSYECNQCGKTLSSYNSLQRHQKIHIEERPYKCQQCTKAFRCLNALQSHERIHTGEKP
YECKHCGTAFSRLTHLRLHEKVHTGEKHYECKQCNIVFKSQSSYHRHKIMHGETFYNCKECGKSFIYPSL
LQMHERTHTGEKPYECKLCGKTFRYHSSIRLHERTHTGEKPYECKHCGKAFTRQSYLQFHERSHTGEKPY
ECKECGKAFRHHSYLRLHERRHTGEKPYQCGQCGRSFSRQSSFKRHQSVHAVENPYKCQQYLIPLSLFPS
NA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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