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Report for CCDS22241.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22241.1 Public Mus musculus 8 Dusp4 23 108 98 CCDS HistoryNCBI Gene:319520Re-query CCDS DB by CCDS ID:22241.1Re-query CCDS DB by GeneID:319520See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22241.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033930.4 ENSMUSP00000033930.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033930.4Link to Ensembl Protein Viewer:ENSMUSP00000033930.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000033930Re-query CCDS DB by Protein ID:ENSMUSP00000033930
Original member NCBI NM_176933.4 NP_795907.1 Updated not alive Link to Nucleotide Sequence:NM_176933.4Link to Protein Sequence:NP_795907.1Re-query CCDS DB by Nucleotide ID:NM_176933Re-query CCDS DB by Protein ID:NP_795907
Current member NCBI NM_176933.5 NP_795907.1 Accepted alive Link to Nucleotide Sequence:NM_176933.5Link to Protein Sequence:NP_795907.1Re-query CCDS DB by Nucleotide ID:NM_176933Re-query CCDS DB by Protein ID:NP_795907Link to BLAST:NP_795907.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_795907.1 398 Q8BFV3 398 100% 0 0

Chromosomal Locations for CCDS 22241.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 34807729 34808173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 34816447 34816592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 34817124 34817343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 34818398 34818783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1197 nt):
ATGGTGACGATGGAGGAACTGCGGGAGATGGACTGCAGCGTGCTCAAAAGGCTGATGAACCGGGATGAGA
ACGGCGGCGGCGGCAGCGCGGGCGGCAACGGCAGCGGCAGCCACGGCGCCTTGGGGCTGCTGAGCGGCGG
CAAGTGCCTGCTGCTGGACTGCAGGCCGTTTCTGGCTCACAGCGCGGGCTACATCCGAGGCTCGGTGAAC
GTGCGCTGCAATACCATCGTGCGGCGGAGGGCCAAGGGCTCCGTGAGCCTGGAGCAGATCCTGCCCGCCG
AGGAAGAGGTGCGTGCCCGCCTGCGCTCTGGCCTCTACTCGGCTGTCATCGTCTACGACGAGCGCAGCCC
GCGCGCCGAGAGTCTCCGGGAGGACAGCACGGTGTCGCTGGTCGTGCAGGCGTTGCGCCGGAACGCGGAG
CGCACGGACATCTGCCTGCTTAAAGGTGGCTATGAGAGGTTTTCTTCTGAATACCCAGAATTCTGCTCTA
AAACCAAGGCCCTGGCCGCCATCCCACCCCCTGTACCTCCCAGCACCAATGAGTCCTTGGACCTGGGCTG
CAGCTCCTGTGGAACCCCGCTGCACGACCAGGGGGGCCCCGTGGAAATCCTCCCTTTCCTCTACCTCGGC
AGTGCCTACCATGCTGCCCGCAGGGACATGTTGGATGCCCTGGGGATCACGGCCCTCCTGAATGTCTCTT
CAGACTGTCCCAATCACTTTGAGGGTCATTACCAGTACAAGTGCATCCCCGTCGAAGACAACCACAAGGC
CGACATCAGCTCCTGGTTCATGGAAGCCATCGAGTACATCGACGCAGTAAAGGACTGTCGAGGGCGAGTG
CTGGTTCACTGCCAGGCCGGCATCTCCCGATCAGCCACCATCTGCCTGGCCTACCTGATGATGAAGAAGC
GGGTGAGGCTGGAGGAGGCTTTTGAGTTCGTCAAGCAGCGCCGAAGCATCATCTCGCCCAACTTCAGCTT
CATGGGCCAGTTGCTGCAGTTTGAGTCTCAGGTGCTCACCACGTCCTGCGCCGCCGAGGCTGCCAGCCCT
TCTGGGCCCCTTCGGGAGAGGGGAAAGGCCACCCCGACCCCCACCTCGCAGTTCGTCTTCAGCTTCCCTG
TGTCTGTGGGCGTGCACGCGGCCCCCAGTAACCTGCCGTACCTGCACAGCCCCATCACCACCTCCCCCAG
CTGTTAG

Translation (398 aa):
MVTMEELREMDCSVLKRLMNRDENGGGGSAGGNGSGSHGALGLLSGGKCLLLDCRPFLAHSAGYIRGSVN
VRCNTIVRRRAKGSVSLEQILPAEEEVRARLRSGLYSAVIVYDERSPRAESLREDSTVSLVVQALRRNAE
RTDICLLKGGYERFSSEYPEFCSKTKALAAIPPPVPPSTNESLDLGCSSCGTPLHDQGGPVEILPFLYLG
SAYHAARRDMLDALGITALLNVSSDCPNHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRV
LVHCQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQLLQFESQVLTTSCAAEAASP
SGPLRERGKATPTPTSQFVFSFPVSVGVHAAPSNLPYLHSPITTSPSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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