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Report for CCDS22112.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22112.1 Public Mus musculus 8 Grk1 23 108 98 CCDS HistoryNCBI Gene:24013Re-query CCDS DB by CCDS ID:22112.1Re-query CCDS DB by GeneID:24013See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 22112.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033827.7 ENSMUSP00000033827.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033827.7Link to Ensembl Protein Viewer:ENSMUSP00000033827.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000033827Re-query CCDS DB by Protein ID:ENSMUSP00000033827
Original member Current member NCBI NM_011881.3 NP_036011.3 Accepted alive Link to Nucleotide Sequence:NM_011881.3Link to Protein Sequence:NP_036011.3Re-query CCDS DB by Nucleotide ID:NM_011881Re-query CCDS DB by Protein ID:NP_036011Link to BLAST:NP_036011.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036011.3 564 Q9WVL4 564 99.8227% 0 1

Chromosomal Locations for CCDS 22112.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 13405118 13405816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13407801 13407928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13409278 13409435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13409815 13409898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13413049 13413173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13414324 13414525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13415954 13416252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1695 nt):
ATGGATTTCGGGTCCTTGGAGACCGTGGTGGCCAACTCTGCCTTCATCGCTGCCCGGGGCAGTTTTGACG
GAAGCAGCACACCGTCTTCCCGAGACAAGAAATATCTGGCCAAGCTCCGGTTGCCCCCACTGTCCAAGTG
TGAGGGTCTCCGTGACAACCTCAGCTTGGAGTTTGAGAGCCTGTGCTCAGAGCAACCCATCGGCAAGAGG
CTCTTCCAACAGTTCTTGAAGACAGACGAGAGACATGTGCCAGCTCTGGAGCTCTGGAAGGACATTGAGG
ACTATGACACTGCTGATGATGACCTGAGGCCACAGAAGGCACAAGCCATCCTGGCTGAGTACCTGGACCC
ACAGGGCACACTCTTCTGCAACTTTCTGGACCAGGGCATGGTGACAAGGGTGAAAGAAGGGCCAACTGGG
AGCCAGGACGGCCTCTTCCAGCCTTTGCTCCAGGCCACAATGGAGCACTTGAGCCAGGCGCCCTTCCAGG
AGTACCTAGAAAGCTTGTATTTCCTGCGGTTTCTTCAGTGGAAGTGGTTGGAAGCCCAGCCCATAGGTGA
AGACTGGTTCTTGGACTTCAGGGTCCTGGGAAAGGGGGGCTTCGGGGAAGTGTCTGCCTGTCAGATGAAG
GCGACTGGCAAGATGTATGCCTGCAAGAAGCTCAACAAGAAACGGCTGAAGAAGAGGAAGGGCTACCAGG
GCGCCATTGTTGAGAAGAGGATTCTGACTAAAGTACACAGCAGGTTCATTGTGTCTCTGGCCTATGCGTT
CGAGACCAAGACGGACCTCTGTCTGGTGATGACCATCATGAACGGAGGTGACGTGAGGTACCACATCTAC
AATGTGGATGAGGATAACCCCGGCTTCTCAGAACCACGGGCCATCTATTACACAGCACAGATCATCAGTG
GCCTGGAGCACCTGCATCAGAGACGCATTGTCTACCGTGACCTCAAGCCAGAGAATGTGCTATTGGACAA
TGATGGCAATATCCGAATTTCTGACCTTGGACTGGCTGTGGAGCTGAAGGAAGGGCAGAATAAGACCAAG
GGCTACGCAGGGACCCCAGGTTTCATGGCCCCTGAGCTCCTGCGAGGTGAAGAATACGACTTCTCTGTGG
ACTACTTTGCCCTGGGGGTCACATTGTACGAGATGATCGCAGCCAGAGGACCCTTCCGAGCCCGAGGAGA
GAAGGTAGAGAACAAGGAGCTTAAGCAACGTATCATCTCAGAGCCTGTGAAGTACCCAGAGAAGTTCAGC
CAGGCCAGCAAGGACTTCTGTGAGCAGCTGTTGGAGAAGGACCCGGAGAAGCGCCTGGGCTTCCGGGATG
GAACCTGTGATGCGCTTCGGGCAAACGTCCTCTTCAAAGATATCAGCTGGAGGCAGCTCGAAGCCGGGAT
GCTCATTCCTCCATTCATCCCAGACTCTAGGACTGTCTATGCCAAGAACATTCAGGACGTGGGTGCCTTT
TCCACAGTCAAGGGTGTGGTTTTTGACAAAGCGGACACAGAGTTCTTCCAAGAATTCGCCTCTGGCAACT
GCTCCATTCCCTGGCAGGAGGAGATGATCGAGACTGGGCTCTTTGGGGACCTAAATGTGTGGCGCGCAGA
TGGTCAGATGCCGGATGACATGAAGGGAATCACCACGGAGGAGGCAGCCCCTACAGCCAAGTCGGGAATG
TGTCTCATCTCCTAG

Translation (564 aa):
MDFGSLETVVANSAFIAARGSFDGSSTPSSRDKKYLAKLRLPPLSKCEGLRDNLSLEFESLCSEQPIGKR
LFQQFLKTDERHVPALELWKDIEDYDTADDDLRPQKAQAILAEYLDPQGTLFCNFLDQGMVTRVKEGPTG
SQDGLFQPLLQATMEHLSQAPFQEYLESLYFLRFLQWKWLEAQPIGEDWFLDFRVLGKGGFGEVSACQMK
ATGKMYACKKLNKKRLKKRKGYQGAIVEKRILTKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDVRYHIY
NVDEDNPGFSEPRAIYYTAQIISGLEHLHQRRIVYRDLKPENVLLDNDGNIRISDLGLAVELKEGQNKTK
GYAGTPGFMAPELLRGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRIISEPVKYPEKFS
QASKDFCEQLLEKDPEKRLGFRDGTCDALRANVLFKDISWRQLEAGMLIPPFIPDSRTVYAKNIQDVGAF
STVKGVVFDKADTEFFQEFASGNCSIPWQEEMIETGLFGDLNVWRADGQMPDDMKGITTEEAAPTAKSGM
CLIS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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