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Report for CCDS21817.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21817.1 Public Mus musculus 7 Rbbp6 23 108 98 CCDS HistoryNCBI Gene:19647Re-query CCDS DB by CCDS ID:21817.1Re-query CCDS DB by GeneID:19647See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21817.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098062.8 ENSMUSP00000095670.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098062.8Link to Ensembl Protein Viewer:ENSMUSP00000095670.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000098062Re-query CCDS DB by Protein ID:ENSMUSP00000095670
Original member NCBI NM_175023.3 NP_778188.1 Updated not alive Link to Nucleotide Sequence:NM_175023.3Link to Protein Sequence:NP_778188.1Re-query CCDS DB by Nucleotide ID:NM_175023Re-query CCDS DB by Protein ID:NP_778188
Current member NCBI NM_175023.4 NP_778188.1 Accepted alive Link to Nucleotide Sequence:NM_175023.4Link to Protein Sequence:NP_778188.1Re-query CCDS DB by Nucleotide ID:NM_175023Re-query CCDS DB by Protein ID:NP_778188Link to BLAST:NP_778188.1

Chromosomal Locations for CCDS 21817.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 122970962 122971127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122975936 122976035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122978576 122978681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (372 nt):
ATGTCCTGTGTGCACTATAAATTTTCCTCTAAACTCAACTACGACACCGTCACTTTTGATGGGCTCCATA
TCTCCCTCTGCGATTTAAAGAAGCAGATTATGGGGAGAGAAAAGCTGAAAGCTGCCGATAGCGATCTGCA
GATCACCAACGCACAGACGAAAGAAGAATACACTGATGACAATGCGCTCATTCCTAAGAACTCATCTGTG
ATTGTCAGGAGGATTCCTATTGGAGGTGTCAAGTCTACAAGCAAGACATATGTTATAAGTCGAACTGAAC
CAGTGATGGGAACTACAAAAGCAGTATGTAAAAACACAATCACCCTTTTTCTACACAATTGCTTTTACCT
TTATAATGTTTCAGTGACGTAA

Translation (123 aa):
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADSDLQITNAQTKEEYTDDNALIPKNSSV
IVRRIPIGGVKSTSKTYVISRTEPVMGTTKAVCKNTITLFLHNCFYLYNVSVT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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