NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS21753.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21753.1 Public Mus musculus 7 Mical2 23 108 98 CCDS HistoryNCBI Gene:320878Re-query CCDS DB by CCDS ID:21753.1Re-query CCDS DB by GeneID:320878See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21753.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000050149.11 ENSMUSP00000051163.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000050149.11Link to Ensembl Protein Viewer:ENSMUSP00000051163.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000050149Re-query CCDS DB by Protein ID:ENSMUSP00000051163
Original member Current member NCBI NM_177282.5 NP_796256.1 Accepted alive Link to Nucleotide Sequence:NM_177282.5Link to Protein Sequence:NP_796256.1Re-query CCDS DB by Nucleotide ID:NM_177282Re-query CCDS DB by Protein ID:NP_796256Link to BLAST:NP_796256.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_796256.1 960 Q8BML1-1 960 100% 0 0

Chromosomal Locations for CCDS 21753.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 112271306 112271569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112303588 112303795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112307004 112307120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112309426 112309527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112311316 112311471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112314972 112315072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112318386 112318643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112319712 112319827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112320607 112320733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112321346 112321436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112322516 112322663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112323478 112323677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112323975 112324081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112328652 112328720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112331896 112332039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112346722 112346908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112349394 112349482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112351325 112351723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2883 nt):
ATGGGAGAGAATGAAGATGAGAAGCAGGCGCAGGCCAGCCAGGTCTTCGAGAACTTTGTGCAAGCTACCA
CATGCAAAGGGACCCTCCAGGCCTTCAACATCCTCACCTGCCTCCTGGACCTAGATCCGCTGGACCATAG
GAACTTCTACTCCCAGCTCAAGTCCAAGGTGAACACCTGGAAGGCCAAAGCCCTGTGGCACAAACTGGAT
AAGCGCGGCTCCCACAAGGAGTACAAGCGAGGAAAAGCCTGCTCGAACACTAAGTGTCTCATCGTCGGAG
GAGGACCATGTGGCTTGCGCACTGCCATTGAACTTGCCTACCTGGGAGCCAAAGTGGTTGTGGTGGAGAA
GAGGGACACCTTCTCCCGGAACAATGTCCTGCACCTCTGGCCCTTCACTATCCATGACCTGCGGGGCCTG
GGGGCCAAGAAGTTCTATGGGAAATTCTGTGCTGGCTCCATCGACCACATCAGTATCCGACAACTGCAGC
TTATCCTCTTCAAGGTGGCCCTGATGCTGGGAGTGGAGGTCCACGTGAATGTGGAGTTTGTGAGGGTGCT
GGAGCCTCCTGAAGACCAAGAGAATCAAAAAGTTGGATGGCGGGCAGAATTCCTTCCTGCAGACCACGCC
CTGTCTGACTTTGAGTTTGATGTCATCATCGGTGCTGACGGTCACAGGAACACGCTAGAAGGCTTCAGGA
GGAAAGAGTTCCGAGGGAAGCTGGCCATCGCCATCACCGCCAACTTCATAAACAGGAACAGCACAGCTGA
GGCCAAGGTGGAGGAGATCAGTGGTGTTGCCTTCATCTTCAACCAGAAGTTCTTCCAGGACCTGAAGGAA
GAAACAGGGATTGATCTCGAGAACATTGTTTACTATAAGGACAGTACCCACTACTTTGTCATGACAGCCA
AGAAGCAGAGCCTGCTGGACAAGGGCGTCATCCTTAATGACTACATTGACACAGAGATGCTGCTGTGTTC
GGAGAATGTGAACCAGGACAACCTGCTCTCCTACGCCAGAGAAGCCGCTGACTTTGCCACCAACTACCAG
CTGCCATCCTTAGACTTTGCCATCAATCACAACGGGCAGCCTGACGTGGCCATGTTCGACTTCACCTCCA
TGTATGCCTCAGAGAACGCAGCTCTGATGCGTGAGCGCCAGGCACACCAGCTGCTCGTGGCTCTTGTGGG
CGACAGCCTGCTTGAGCCATTTTGGCCCATGGGCACAGGCTGTGCCCGAGGCTTCCTGGCAGCCTTTGAC
ACGGCATGGATGGTGAAGAGCTGGGACCAGGGCACCCCTCCCCTGGAGGTATTAGCTGAAAGAGAGAGTC
TTTACAGGCTGTTACCTCAGACAACCCCAGAGAACATCAACAAAAATTTTGAGCAGTACACATTGGACCC
AGCCACGCGGTACCCAAACCTCAACCTGCACTGCGTCAGGCCTCACCAGGTGAAGCATTTGTACATCACT
AAGGAGATGGACCGCTTCCCTCTCGAGAGATGGGGCTCAGTGAGGAGATCTGTCAGCCTCTCCAGGCGGG
AGTCAGACATCCGGCCTAACAAGCTTTTAACCTGGTGCCAGCAGCAGACCAAGGGTTACCAGCACGTCAG
AGTCACTGACCTGACCACATCCTGGCGCAGCGGCTTGGCCCTGTGTGCCATCATCCACAGCTTCCGGCCA
GAGCTGATCAACTTTGACTCGCTGAATGAAGATGACGCTGTGGAGAACAACCAACTGGCATTTGATGTGG
CCAAGCGTGAGTTTGGGATCCTGCCTGTGACCACAGGCAAAGAGATGGCATCTACCCAGGAGCCAGACAA
GCTCAGCATGGTCATGTACCTCTCCAAGTTCTATGAGCTCTTCCGGGGCACTCCACTGAGACCCATGGAT
TCCTGGCGTAAAAACTATGGAGAAAATGCTGACTTTGGCTTGGGCAAAACATTCATTCAGAATAACTATC
TCAACCTCACATTGCCCAGAAAGAGGACCCCACGGGTAGACACCCAGACTGAAGAGAATGACATGAACAA
GAGGCGGCGACAAGGCTTCAACCACCTGGAAGAGCTGCCATCCTTCTCCAGCCGCAGCCTGGGCTCCAGT
CAAGAGTATGCTAAAGAAAGTGGCAGTCAGAACAAGGTCAAGCACATGGCCAATCAGCTGCTAGCCAAGT
TTGAGGAGAACACTCGGAACCCTTCAGTCGTGAAACAGGAATCCCCGAGAAAGGCATTCCCCCTGAGCCT
GGGCGGCAGAGACACCTGCTACTTTTGTAAGAAGCGTGTATACATGATAGAGCGGCTGAGTGCTGAGGGC
CACTTTTTCCACCAAGAGTGCTTCCGTTGCAGCGTCTGCAGTGCCACCCTGCGCCTGGCTGCCTATGCCT
TTGACTGCGATGAAGGCAAATTTTACTGCAAGCCCCATTTTGTTCACTGCAAAACCAGTAGCAAACAGCG
AAAGAGACGGGCAGAGCTGAATCAGCAAAGAGAGGAGGAAGGAACATGGCAGGAGCAGGAAGCACCTCGG
AGGGATGTACCCACAGAAAGCTCTTGTGCAGTGGCGGCCATCAGCACGCCAGAAGGCAGCCCCCCAGGTA
CCTCCACCTCCTTCTTTAGGAAGGCACTCAGCTGGCCTCTCCGGCTGACAAGAGGCCTGCTCAACCTGCC
CCAGAGCCTGCTTAGGTGGATGCAGGGACTCCAGGAGGCTGCTGGCCACCATGTGCGGGACAATGCTCAC
AACTACTGCTTCATGTTTGAGCTCCTGAGCCTGGGGCTGCTACTGCTCTGGGCTTTCTCCAAGGTCCTGG
CTGCCATGTACAGAGAGTCTGAGGAGTCTCTGGAGAACATCCGCAGCTGGCTGCTCAGGTTTATCCCAGT
GAAGCTGCAGTGA

Translation (960 aa):
MGENEDEKQAQASQVFENFVQATTCKGTLQAFNILTCLLDLDPLDHRNFYSQLKSKVNTWKAKALWHKLD
KRGSHKEYKRGKACSNTKCLIVGGGPCGLRTAIELAYLGAKVVVVEKRDTFSRNNVLHLWPFTIHDLRGL
GAKKFYGKFCAGSIDHISIRQLQLILFKVALMLGVEVHVNVEFVRVLEPPEDQENQKVGWRAEFLPADHA
LSDFEFDVIIGADGHRNTLEGFRRKEFRGKLAIAITANFINRNSTAEAKVEEISGVAFIFNQKFFQDLKE
ETGIDLENIVYYKDSTHYFVMTAKKQSLLDKGVILNDYIDTEMLLCSENVNQDNLLSYAREAADFATNYQ
LPSLDFAINHNGQPDVAMFDFTSMYASENAALMRERQAHQLLVALVGDSLLEPFWPMGTGCARGFLAAFD
TAWMVKSWDQGTPPLEVLAERESLYRLLPQTTPENINKNFEQYTLDPATRYPNLNLHCVRPHQVKHLYIT
KEMDRFPLERWGSVRRSVSLSRRESDIRPNKLLTWCQQQTKGYQHVRVTDLTTSWRSGLALCAIIHSFRP
ELINFDSLNEDDAVENNQLAFDVAKREFGILPVTTGKEMASTQEPDKLSMVMYLSKFYELFRGTPLRPMD
SWRKNYGENADFGLGKTFIQNNYLNLTLPRKRTPRVDTQTEENDMNKRRRQGFNHLEELPSFSSRSLGSS
QEYAKESGSQNKVKHMANQLLAKFEENTRNPSVVKQESPRKAFPLSLGGRDTCYFCKKRVYMIERLSAEG
HFFHQECFRCSVCSATLRLAAYAFDCDEGKFYCKPHFVHCKTSSKQRKRRAELNQQREEEGTWQEQEAPR
RDVPTESSCAVAAISTPEGSPPGTSTSFFRKALSWPLRLTRGLLNLPQSLLRWMQGLQEAAGHHVRDNAH
NYCFMFELLSLGLLLLWAFSKVLAAMYRESEESLENIRSWLLRFIPVKLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH