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Report for CCDS21721.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21721.1 Public Mus musculus 7 Or5p79 23 108 98 CCDS HistoryNCBI Gene:258738Re-query CCDS DB by CCDS ID:21721.1Re-query CCDS DB by GeneID:258738See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21721.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000080014.1 ENSMUSP00000078926.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000080014.1Link to Ensembl Protein Viewer:ENSMUSP00000078926.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000080014Re-query CCDS DB by Protein ID:ENSMUSP00000078926
Original member Current member NCBI NM_146743.1 NP_666954.1 Accepted alive Link to Nucleotide Sequence:NM_146743.1Link to Protein Sequence:NP_666954.1Re-query CCDS DB by Nucleotide ID:NM_146743Re-query CCDS DB by Protein ID:NP_666954Link to BLAST:NP_666954.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666954.1 316 Q8VG13 316 100% 0 0

Chromosomal Locations for CCDS 21721.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 108621814 108622764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGGTATCCTGAAGGATGGGAACCACACTGCAGTGACAGAGTTCATTTTATTGGGTTTAACAGATGACC
CAGTCCTTAAAGTTGTCCTCTTCACCATCATCCTGTGCATCTACCTGGTGACTGTGTCTGGGAACCTCAG
CACCATCCTTCTCATCAGAGTCTCTTCCCAGCTCCATCACCCCATGTACTTTTTTCTCAGCCACTTGGCT
TCTGTTGACATAGGCATTTCATCTTCTGTCACACCCAATATGCTTGTCAACTTCCTGCTGGAGAGAAGCA
CAATCTCCTACCTTGGATGTGGCATCCAGCTTGGCTCAGGTGCTTTTTTTGGATCAACTGAGTCATTTCT
TCTGGCTGCCATGGCTTATGATCACTTCATGGCAATCTGTAACCCACTACTTTATTCCACCAAAATGTCC
ACACAAGTCTGTATCCAGTTGCTAGTGGGATCTTATATAGGGGGTTTTCTTAATGCTTCCTCTTTTATAC
TTTCCTTCTTTTCTTTTCTCTTCTGTGGACCAAATAAAGTCAATCACTTTTTCTGTGATTTTACTCCTTT
AGTTGAACTCTCCTGTTCTGATAACAGTGTCCTGCTAATTCTTGATTCATTTTCTGCTGGCTCCATCATT
GTGATCACAGTGTTGGTCATAGCCATCTCCTACACCTACATCCTCATCACCATCCTGAAGATGCACTCCA
CTGAGGGTCGACACAAGGCCTTTTCCACCTGCACCTCCCACCTCACAGCAGTCACTGTTTTCTATGGAAC
TGTCACATTCATTTATGTGATGCCAAAGTCCAGCTACTCCACAGACCAAAACAAGGTGTTGTCTGTGTTT
TACATGATAGCGATAGCAATCCCCATGTTGAACCCCCTAATCTACAGCCTTAGGAATAATGAGATTAAGA
ATGCTCTGAAGAGACAGCTTAGTAAAAAAACATTTTCTTAG

Translation (316 aa):
MGILKDGNHTAVTEFILLGLTDDPVLKVVLFTIILCIYLVTVSGNLSTILLIRVSSQLHHPMYFFLSHLA
SVDIGISSSVTPNMLVNFLLERSTISYLGCGIQLGSGAFFGSTESFLLAAMAYDHFMAICNPLLYSTKMS
TQVCIQLLVGSYIGGFLNASSFILSFFSFLFCGPNKVNHFFCDFTPLVELSCSDNSVLLILDSFSAGSII
VITVLVIAISYTYILITILKMHSTEGRHKAFSTCTSHLTAVTVFYGTVTFIYVMPKSSYSTDQNKVLSVF
YMIAIAIPMLNPLIYSLRNNEIKNALKRQLSKKTFS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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