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Report for CCDS21684.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21684.1 Public Mus musculus 7 Or10a5 23 108 98 CCDS HistoryNCBI Gene:259036Re-query CCDS DB by CCDS ID:21684.1Re-query CCDS DB by GeneID:259036See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21684.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098139.1 ENSMUSP00000095743.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098139.1Link to Ensembl Protein Viewer:ENSMUSP00000095743.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000098139Re-query CCDS DB by Protein ID:ENSMUSP00000095743
Original member Current member NCBI NM_147034.2 NP_667245.1 Accepted alive Link to Nucleotide Sequence:NM_147034.2Link to Protein Sequence:NP_667245.1Re-query CCDS DB by Nucleotide ID:NM_147034Re-query CCDS DB by Protein ID:NP_667245Link to BLAST:NP_667245.1

Chromosomal Locations for CCDS 21684.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 107036136 107037110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (975 nt):
ATGTTATTTATGCTCATTCCCATGGCTACAGGAAACCAGACAAGAATAACTGAATTTATCCTCATGAGCT
TCTCTTCCCTACCTACTGAAATACAGACCTTACTCTTCCTGGCATTTCTCACCATCTACCTGGTTACTCT
GCTGGGAAACAGCCTCATCATTCTGGTGACCTTGGCTGACCCCATGCTGCAAAGCCCCATGTATTTCTTT
CTCAGGAACTTATCCTTCTTAGAGATTGGCTTCAATCTAGTCATTGTGCCCAAAATGTTGGGGACTCTGA
TTGCGCAGGACACAAGCATCTCCTTCCTGGGCTGTGCCACTCAGATGTATTTCTTCTTCTTCTTTGGAGT
GGCTGAGTGCTTCCTCCTTGCCACCATGGCATATGACCGCTATGTGGCCATCTGCAGTCCCTTGCATTAC
CCAGTCATCATGAACCAAGAGACACGTGTCAAACTGGCTGCTGCCTCCTGGTTTCCAGGATTCCCTGTAG
CCACCGTGCAGACCACATGGCTCTTCAGTTTTCCATTCTGTGCCACCAACAAAGTGAATCACTTCTTCTG
TGACAGCCCACCTGTGCTGAGGCTGGTCTGTGCAGACACAGCACAATTTGAAGTCTATGCCATTGTTGGG
ACTATTCTGGTTGTCATGATACCCTGCCTGCTGATCCTATGTTCATACACTCTCATTGCGGCTTCCATCC
TCAAGATTCCATCAGCTAAAGGGAAGCACAAAGCCTTCTCCACCTGTTCCTCACATCTCCTCGTTGTCTC
TCTTTTCTATGTGTCTTCAAGCCTCACTTACTTTAGGCCTAAATCAAATAATTCTCCTGAAAGCAAGAAA
TTGTTATCGTTGTCCTACACTGTTGTGACTCCCATGTTGAACCCCATCATCTATAGCCTGAGAAATAATG
AGGTGAAGAGTGCCCTCAGCAGGACCTTCCACAAGGCCCTGGCCCTCAGAAACCATATCACATAA

Translation (324 aa):
MLFMLIPMATGNQTRITEFILMSFSSLPTEIQTLLFLAFLTIYLVTLLGNSLIILVTLADPMLQSPMYFF
LRNLSFLEIGFNLVIVPKMLGTLIAQDTSISFLGCATQMYFFFFFGVAECFLLATMAYDRYVAICSPLHY
PVIMNQETRVKLAAASWFPGFPVATVQTTWLFSFPFCATNKVNHFFCDSPPVLRLVCADTAQFEVYAIVG
TILVVMIPCLLILCSYTLIAASILKIPSAKGKHKAFSTCSSHLLVVSLFYVSSSLTYFRPKSNNSPESKK
LLSLSYTVVTPMLNPIIYSLRNNEVKSALSRTFHKALALRNHIT


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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