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Report for CCDS21670.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21670.1 Public Mus musculus 7 Or2ag17 23 108 98 CCDS HistoryNCBI Gene:258180Re-query CCDS DB by CCDS ID:21670.1Re-query CCDS DB by GeneID:258180See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21670.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000065024.1 ENSMUSP00000068023.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000065024.1Link to Ensembl Protein Viewer:ENSMUSP00000068023.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000065024Re-query CCDS DB by Protein ID:ENSMUSP00000068023
Original member Current member EBI ENSMUST00000216307.1 ENSMUSP00000149112.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000216307.1Link to Ensembl Protein Viewer:ENSMUSP00000149112.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000216307Re-query CCDS DB by Protein ID:ENSMUSP00000149112
Original member Current member EBI ENSMUST00000215952.1 ENSMUSP00000150923.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000215952.1Link to Ensembl Protein Viewer:ENSMUSP00000150923.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000215952Re-query CCDS DB by Protein ID:ENSMUSP00000150923
Original member Current member NCBI NM_001011862.1 NP_001011862.1 Accepted alive Link to Nucleotide Sequence:NM_001011862.1Link to Protein Sequence:NP_001011862.1Re-query CCDS DB by Nucleotide ID:NM_001011862Re-query CCDS DB by Protein ID:NP_001011862Link to BLAST:NP_001011862.1

Chromosomal Locations for CCDS 21670.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 106790049 106790999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGAGTCCTGGAACTCCACATTGGGAGGTACCTTCATCTTGGTGGGGATTCTAGATGACAGTGGCTCTC
CTGATCTGCTCTGTGCTGTAATCACAGCCCTGTACATGTTAGCTATGATCAGCAATGGGCTGCTTCTGCT
GGTCATCACCATGGATGCACAGCTCCACGTACCTATGTACCTTCTGCTTGGGCAGCTCTCTCTCATAGAC
TTCTTTCTCACATCAATTATTATCCCCAAGGCTGTCATGGATTTTCTGCTAAAAGACAACACCATATCAT
TAGAGGGCTGTGCCCTTCAGATGTTCCTAGCACTGACACTTGGTGGTGCAGAAGACCTCCTTCTGGCCTT
CATGGCCTATGACAGGTATGTGGCTATTTGTCATCCTCTGAACTATATGATTTTCATGAGACCAAGCATC
TGCTGGCTTGGAGTAGCCACATCATGGATCCTGGGACTTCTGAGTGCTCTAGGATATACCATCCATACAA
TGCAATATCCCTTCTGCAAATCCCGTAAAATCAGAGATCTATATTGTGAAATCCCTCCATTGCTGAAGCT
GGCTTGTGCAGACACCTCCAAATATGAACTCATGGTTTATGTGATGGGTGTGGCCTTCCTAATTCCCCCA
CTTGCTGCCATCCTAGCTTCCTACATATTAATTCTTTTCACAGTGCTTAACAAGCCTTCAAATGAAGGAA
GGAAGAAAGCACTTGTCACCTGTTTTTCTCACTTGACAGTAGTTGGTCTGTACTATGGGGCTCTCACAGT
TATGTATGTCCTACCCAGTTCCTATCTTAGTCCCAAACAAGAGAACCTCCTCTCTGTTTTCTACACTGTC
GTGACCCCAGCTCTAAACCCCCTCATTTACAGCCTGAGGAATAAGGAGGTCACTGGGGCCTTGAGGAGGG
TCTTGGGTAAGTGGTTTCTGCCTACACAGTCTACTTTTTAG

Translation (316 aa):
MESWNSTLGGTFILVGILDDSGSPDLLCAVITALYMLAMISNGLLLLVITMDAQLHVPMYLLLGQLSLID
FFLTSIIIPKAVMDFLLKDNTISLEGCALQMFLALTLGGAEDLLLAFMAYDRYVAICHPLNYMIFMRPSI
CWLGVATSWILGLLSALGYTIHTMQYPFCKSRKIRDLYCEIPPLLKLACADTSKYELMVYVMGVAFLIPP
LAAILASYILILFTVLNKPSNEGRKKALVTCFSHLTVVGLYYGALTVMYVLPSSYLSPKQENLLSVFYTV
VTPALNPLIYSLRNKEVTGALRRVLGKWFLPTQSTF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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