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Report for CCDS21549.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21549.1 Public Mus musculus 7 Or51f2 23 108 98 CCDS HistoryNCBI Gene:259095Re-query CCDS DB by CCDS ID:21549.1Re-query CCDS DB by GeneID:259095See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21549.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098216.1 ENSMUSP00000095818.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098216.1Link to Ensembl Protein Viewer:ENSMUSP00000095818.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000098216Re-query CCDS DB by Protein ID:ENSMUSP00000095818
Original member Current member NCBI NM_147091.2 NP_667302.2 Accepted alive Link to Nucleotide Sequence:NM_147091.2Link to Protein Sequence:NP_667302.2Re-query CCDS DB by Nucleotide ID:NM_147091Re-query CCDS DB by Protein ID:NP_667302Link to BLAST:NP_667302.2

Chromosomal Locations for CCDS 21549.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 102877122 102878063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGCTCATCCTTAATAATACCCATTCCCAGCTTCCAACCTTCCTCCTCACTGGTATCCCAGGCCTGAGAG
CAGCTCAGGTCTGGATCTCCATTCCCTTTTGCCTCCTTTACCTTTCTGGGAACAGCATGATCCTGCTGGT
GATCGTTCGTGAGCAGAGCCTCCATGAGCCTATGTACTACTTTCTCTCTATGCTCTCCATCACAGACTTG
AGCTTGTCTCTCTGCACACTTTCCACTACCCTTGGTGTCCTCTGGTTTGAAGCTCGAGAGATCAATTTAA
ATGCGTGTATTGCCCAGATGTTCTTTCTCCATGGGTTTACTTTCATGGAATCCGGAGTTCTGCTGGCCAT
GGCCTTTGATCGTTTTGTGGCTATCTGTGATCCACTAAGATATACCACTATTCTTACCAATGCCAGGATT
GCCCAGATTGGCACAATTGTGTTGATAAGGAATGTTGCCGTCATGTTGCCAGTTGTGCTCTTTGTCAAGA
GGTTGTCCTTCTGCAGTTCTCTGGTTCTTTCACATTCATACTGCTACCATGTAGATGTCATCCAGCTCTC
ATGTACAGACAACAGAATCAATAGCGTTCTTGGTCTGTTTGCACTATTCTCTACTACAGGGTTTGACTGC
CCTTGCATCTTGCTGTCCTATGTACTGATCATCCGATCTGTCCTCAGCATTGCTTCCTCTGATGAGCGAC
AGAAAGCCTTCAATACATGCATATCCCACATCAGTGCTGTTGCCATCTTCTACATTCCTCTCATCAGCTT
GTCTCTTGTACACCGCTACGGCCATTCAGCACCCGCCTTTGTCCACACCGTCATGGCCAACGTCTTCCTG
CTCATCCCTCCTGTGCTCAACCCTATAATCTACAGTGTGAAGACGAAGCAGATTCGAAAGGCTATTCTCA
AGGTGTTAAATCAGAAACAAAACCAGCTTTAA

Translation (313 aa):
MLILNNTHSQLPTFLLTGIPGLRAAQVWISIPFCLLYLSGNSMILLVIVREQSLHEPMYYFLSMLSITDL
SLSLCTLSTTLGVLWFEAREINLNACIAQMFFLHGFTFMESGVLLAMAFDRFVAICDPLRYTTILTNARI
AQIGTIVLIRNVAVMLPVVLFVKRLSFCSSLVLSHSYCYHVDVIQLSCTDNRINSVLGLFALFSTTGFDC
PCILLSYVLIIRSVLSIASSDERQKAFNTCISHISAVAIFYIPLISLSLVHRYGHSAPAFVHTVMANVFL
LIPPVLNPIIYSVKTKQIRKAILKVLNQKQNQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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