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Report for CCDS21535.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21535.1 Public Mus musculus 7 Or51r1 23 108 98 CCDS HistoryNCBI Gene:259108Re-query CCDS DB by CCDS ID:21535.1Re-query CCDS DB by GeneID:259108See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21535.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098225.2 ENSMUSP00000095828.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098225.2Link to Ensembl Protein Viewer:ENSMUSP00000095828.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000098225Re-query CCDS DB by Protein ID:ENSMUSP00000095828
Original member Current member EBI ENSMUST00000216524.1 ENSMUSP00000149536.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000216524.1Link to Ensembl Protein Viewer:ENSMUSP00000149536.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000216524Re-query CCDS DB by Protein ID:ENSMUSP00000149536
Original member Current member NCBI NM_147104.2 NP_667315.2 Accepted alive Link to Nucleotide Sequence:NM_147104.2Link to Protein Sequence:NP_667315.2Re-query CCDS DB by Nucleotide ID:NM_147104Re-query CCDS DB by Protein ID:NP_667315Link to BLAST:NP_667315.2

Chromosomal Locations for CCDS 21535.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 102578497 102579447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGTTCTGCAATACCAGCACTCCTGGTCACTCCACCTTCCTCCTCACTGGCTTTCCAGGCCTGGAGGCCT
CCCATCACTGGGTTTCCATTCCCATCAACCTCATCTGTGTGGTTTCCATCCTGGGCAACAGCGTTATCCT
TTTCCTGATCCGTACGGATCCAGCCTTACATGAGCCCATGTTCATCTTCCTGTCCATGCTAGCAGCCTCT
GATCTGGGCCTCTGTGCCTCCACCTTCCCCACCATGGTGCGGCTCTTCTGGCTGGGTACTCGGGAGCTGC
CCTTCGATTTCTGTGCAGCACAGATGTTTTTCATCCACGCCTTCACCTATGTGGAATCTGGTGTGCTATT
GGCCATGGCCTTTGATCGCTTCATTGCCATCCGGGATCCTCTGCATTATGCCACCATCCTGCCTCACTCA
GCAGTGGCCAAAGTTGGGGCTGCTGTTCTGGTGAGGGCCATCCTGCTCAACCTTCCCGGACCCATCCTTC
TGCGGCGTCTGATCTTTCCTCAGATCAGTACCCTCTCCCACTGCTACTGTCTGCACTGCGACCTCGTGGG
ACTGGCTTGCTCAGACACCCGCATCAACAGCCTGGTTGGCCTGGTTTCCATCCTCCTCTCACTAGGCCTA
GACTCCTCCCTCATCATGCTGTCCTATGCTCTGATCCTACGGACTGTGCTGGGCATTGCATCACCCGGGG
AAAGGCTTAAGGCACTCAATACGTGTGTCTCACACCTCTGCATCGTTCTCATCTTTTATTTGCCCAAGTT
GGGGCTGTCCGTGCTGCACCGAGTGGAGAAACACAGCTACCCAGCTCTGGCCGTGCTCATGGCTAACCTG
CACTTCTTGGTGCCACCCTTCATGAACCCTGTGGTCTACTGTATCAAGTCGAAGCAGATCCGTCAGGGCT
TCTTAAGGCGTTTCCAGCAGAAGAGGGTTGATATTTCCTAA

Translation (316 aa):
MFCNTSTPGHSTFLLTGFPGLEASHHWVSIPINLICVVSILGNSVILFLIRTDPALHEPMFIFLSMLAAS
DLGLCASTFPTMVRLFWLGTRELPFDFCAAQMFFIHAFTYVESGVLLAMAFDRFIAIRDPLHYATILPHS
AVAKVGAAVLVRAILLNLPGPILLRRLIFPQISTLSHCYCLHCDLVGLACSDTRINSLVGLVSILLSLGL
DSSLIMLSYALILRTVLGIASPGERLKALNTCVSHLCIVLIFYLPKLGLSVLHRVEKHSYPALAVLMANL
HFLVPPFMNPVVYCIKSKQIRQGFLRRFQQKRVDIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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