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Report for CCDS2153.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2153.1 Public Homo sapiens 2 SAP130 24 110 108 CCDS HistoryNCBI Gene:79595Re-query CCDS DB by CCDS ID:2153.1Re-query CCDS DB by GeneID:79595See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2153.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000259235.7 ENSP00000259235.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000259235.7Link to Ensembl Protein Viewer:ENSP00000259235.3Re-query CCDS DB by Nucleotide ID:ENST00000259235Re-query CCDS DB by Protein ID:ENSP00000259235
Original member Current member NCBI NM_024545.4 NP_078821.2 Accepted alive Link to Nucleotide Sequence:NM_024545.4Link to Protein Sequence:NP_078821.2Re-query CCDS DB by Nucleotide ID:NM_024545Re-query CCDS DB by Protein ID:NP_078821Link to BLAST:NP_078821.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078821.2 1048 Q9H0E3-1 1048 100% 0 0

Chromosomal Locations for CCDS 2153.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 127942006 127942164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127942424 127942537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127945456 127945559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127949869 127949994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127950160 127950408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127954986 127955344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127986785 127986962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127989564 127989866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127993187 127993308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127996350 127996491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127999741 127999845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128000056 128000146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128000307 128000454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128010269 128010393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128013030 128013154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128014803 128014914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128016389 128016547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128017680 128017915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128026181 128026298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128027092 128027163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3147 nt):
ATGGGCCCTCCGCGGCACCCCCAGGCCGGCGAGATAGAAGCGGGCGGTGCGGGCGGCGGGCGGCGGCTAC
AG
GTGGAAATGAGTTCTCAACAGTTTCCTCGGTTAGGAGCCCCTTCTACCGGGCTGAGCCAGGCCCCTTC
T
CAGATTGCAAACAGTGGTTCTGCTGGATTGATAAACCCAGCTGCTACAGTCAATGATGAATCTGGTCGA
GAT
TCTGAAGTCAGTGCCAGGGAGCACATGAGTTCCAGCAGCTCCCTCCAGTCCCGGGAGGAGAAGCAAG
AG
CCTGTTGTGGTAAGGCCCTATCCACAGGTGCAGATGTTGTCGACACACCATGCTGTCGCATCAGCCAC
A
CCTGTTGCAGTGACAGCCCCGCCAGCACACCTGACGCCAGCAGTGCCACTTTCATTTTCGGAGGGACTT
ATG
AAGCCGCCCCCGAAGCCCACCATGCCTAGCCGTCCCATTGCTCCTGCTCCACCTTCTACCCTGTCAC
TT
CCCCCCAAGGTTCCAGGGCAGGTTACCGTTACCATGGAGAGTAGCATCCCTCAAGCTTCAGCCATTCC
T
GTGGCAACAATCAGTGGACAACAGGGCCATCCCAGTAACCTGCATCACATCATGACTACAAATGTGCAA
ATG
TCTATCATCCGCAGCAATGCTCCTGGGCCCCCTCTTCACATTGGAGCTTCTCATTTACCTCGAGGTG
CA
GCTGCTGCTGCTGTGATGTCCAGTTCTAAAGTAACCACAGTCCTGAGGCCGACCTCACAGCTGCCAAA
T
GCTGCTACTGCTCAGCCAGCAGTACAGCACATCATTCACCAACCAATCCAGTCTCGGCCACCTGTGACC
ACC
TCCAATGCCATCCCTCCTGCTGTGGTAGCAACTGTCTCAGCCACCAGAGCTCAGTCTCCAGTCATCA
CT
ACGACAGCGGCGCATGCTACTGATTCAGCACTTAGTAGGCCAACCTTGTCTATCCAGCATCCTCCATC
T
GCAGCAATCAGTATTCAGCGTCCTGCCCAGTCACGAGATGTCACAACAAGAATCACACTACCATCTCAC
CCT
GCATTAGGGACGCCAAAACAGCAGCTTCATACAATGGCTCAGAAAACAATCTTCAGTACTGGCACGC
CA
GTGGCTGCAGCCACAGTAGCACCTATTTTGGCAACCAACACCATTCCTTCAGCGACCACAGCTGGATC
T
GTGTCACACACGCAAGCTCCCACAAGTACCATTGTTACCATGACAGTACCCTCCCATTCCTCCCATGCT
ACT
GCTGTGACCACCTCAAACATCCCAGTCGCCAAGGTGGTGCCCCAGCAGATCACGCACACTTCTCCTC
GG
ATCCAGCCAGACTACCCTGCCGAGAGGAGTAGCCTGATTCCCATCTCCGGACATCGGGCCTCTCCCAA
T
CCTGTGGCCATGGAAACCCGAAGTGACAACAGACCGTCTGTTCCCGTTCAGTTCCAATATTTTTTGCCA
ACT
TACCCCCCTTCTGCATACCCACTGGCGGCACATACCTACACCCCAATCACCAGTTCCGTGTCCACTA
TC
CGACAGTATCCAGTTTCAGCTCAGGCTCCAAACTCTGCCATCACAGCTCAGACTGGTGTTGGGGTAGC
G
TCTACCGTCCACCTAAACCCCATGCAGTTGATGACAGTGGATGCATCGCATGCTCGACATATTCAAGGG
ATC
CAGCCAGCACCCATCAGTACCCAGGGTATCCAGCCGGCCCCCATTGGGACCCCAGGGATACAGCCTG
CA
CCACTTGGCACACAGGGAATTCACTCAGCAACCCCAATCAACACACAAGGGCTTCAGCCTGCACCTAT
G
GGTACTCAGCAGCCTCAGCCTGAAGGAAAGACTTCAGCAGTGGTGTTGGCAGATGGAGCCACAATTGTG
GCC
AACCCTATTAGCAATCCATTCAGTGCTGCTCCAGCAGCAACAACCGTGGTGCAGACCCACAGCCAGA
GT
GCTAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGCATACTCCGGAAGAAACCTGCCAC
A
GATGGTGCCAAACCCAAGTCTGAAATCCACGTGTCTATGGCCACTCCGGTCACTGTGTCCATGGAGACT
GTA
TCCAATCAAAATAATGATCAGCCTACCATTGCCGTCCCTCCAACTGCCCAGCAGCCCCCACCGACCA
TT
CCAACTATGATTGCAGCAGCCAGTCCCCCGTCACAACCAGCCGTTGCCCTTTCAACCATTCCTGGAGC
G
GTCCCCATCACTCCACCCATCACCACCATTGCAGCTGCACCACCTCCATCAGTCACTGTGGGTGGCAGT
CTT
TCCTCCGTCTTGGGCCCTCCCGTTCCTGAAATTAAAGTGAAAGAAGAAGTAGAACCAATGGATATCA
TG
AGGCCAGTTTCTGCAGTTCCTCCACTGGCTACCAACACTGTGTCTCCATCTCTTGCATTGCTGGCAAA
C
AACTTGTCCATGCCTACAAGTGACCTACCACCTGGTGCCTCCCCAAGGAAAAAGCCTCGAAAGCAACAG
CAT
GTGATCTCAACAGAAGAAGGTGACATGATGGAGACAAACAGCACTGATGATGAGAAGTCCACTGCCA
AG
AGTCTTCTGGTGAAGGCTGAGAAGCGCAAGTCTCCTCCCAAGGAGTATATTGATGAGGAAGGTGTGAG
A
TATGTCCCAGTGCGTCCAAGACCCCCCATTACTTTGCTTCGTCACTATCGGAACCCCTGGAAAGCTGCT
TAC
CACCACTTTCAGAGGTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAGCTATGCTGCAGGAAATAG
CT
AATCAGAAAGGAGTATCCTGTCGTGCTCAAGGCTGGAAAGTCCACCTCTGTGCTGCCCAGTTACTACA
G
CTGACGAATCTAGAACATGATGTCTATGAAAGACTTACTAACCTGCAGGAAGGGATTATCCCAAAGAAA
AAA
GCAGCAACAGATGATGATCTCCACCGAATAAACGAACTGATACAGGGAAATATGCAGAGGTGTAAAC
TT
GTGATGGATCAAATCAGTGAAGCCAGAGACTCCATGCTTAAGGTTTTAGATCATAAAGACCGTGTCCT
G
AAGCTGCTTAACAAGAACGGGACTGTCAAAAAAGTGTCCAAATTGAAGCGAAAGGAAAAAGTCTAG


Translation (1048 aa):
MGPPRHPQAGEIEAGGAGGGRRLQVEMSSQQFPRLGAPSTGLSQAPSQIANSGSAGLINPAATVNDESGR
D
SEVSAREHMSSSSSLQSREEKQEPVVVRPYPQVQMLSTHHAVASATPVAVTAPPAHLTPAVPLSFSEGL
M
K
PPPKPTMPSRPIAPAPPSTLSLPPKVPGQVTVTMESSIPQASAIPVATISGQQGHPSNLHHIMTTNVQ
M
SIIRSNAPGPPLHIGASHLPR
GAAAAAVMSSSKVTTVLRPTSQLPNAATAQPAVQHIIHQPIQSRPPVT
T
SNAIPPAVVATVSATRAQSPVITTTAAHATDSAL
SRPTLSIQHPPSAAISIQRPAQSRDVTTRITLPSH
P
ALGTPKQQLHTMAQ
KTIFSTGTPVAAATVAPILATNTIPSATTAGSVSHTQAPTSTIVTMTVPSHSSHA
T
AVTTSNIPV
AKVVPQQITHTSPRIQPDYPAERSSLIPISGHRASPNPVAMETRSDNRPSVPVQFQYFLP
T
YPPSAYPLAAHTYTPITSSVSTIRQYP
VSAQAPNSAITAQTGVGVASTVHLNPMQLMTVDASHARHIQG
I
QPAPISTQGIQPAPIGTPGIQPAPLGTQGIHSATPINTQGLQPAPMGTQQPQPEGKTS
AVVLADGATIV
A
NPISNPFSAAPAATTVVQTHSQSASTNAPAQGSSPRPSILRKKPATD
GAKPKSEIHVSMATPVTVSMET
V
SNQNNDQPTIAVPPTAQQPPPTIPTMIAAASPPSQPAVALSTIPGAVPITPPITTIAAAPPPSVTVGGS
L
SSVLGPPVPEIKVKEEVEPMDIMRPVS
AVPPLATNTVSPSLALLANNLSMPTSDLPPGASPRKKPRKQQ
H
VISTEEGDMMETNSTDDEKSTAKSLLVKAEKRKSPPKEYI
DEEGVRYVPVRPRPPITLLRHYRNPWKAA
Y
HHFQRYSDVRVK
EEKKAMLQEIANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTNLQEGIIPKK
K
AATDDDLHRINELIQ
GNMQRCKLVMDQISEARDSMLKVLDHKDRVLKLLNKNGTVKKVSKLKRKEKV



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser