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Report for CCDS21486.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21486.1 Public Mus musculus 7 Or2at4 23 108 98 CCDS HistoryNCBI Gene:259066Re-query CCDS DB by CCDS ID:21486.1Re-query CCDS DB by GeneID:259066See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21486.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098264.1 ENSMUSP00000095864.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098264.1Link to Ensembl Protein Viewer:ENSMUSP00000095864.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000098264Re-query CCDS DB by Protein ID:ENSMUSP00000095864
Original member Current member EBI ENSMUST00000220185.1 ENSMUSP00000151459.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000220185.1Link to Ensembl Protein Viewer:ENSMUSP00000151459.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000220185Re-query CCDS DB by Protein ID:ENSMUSP00000151459
Original member Current member NCBI NM_147063.2 NP_667274.2 Accepted alive Link to Nucleotide Sequence:NM_147063.2Link to Protein Sequence:NP_667274.2Re-query CCDS DB by Nucleotide ID:NM_147063Re-query CCDS DB by Protein ID:NP_667274Link to BLAST:NP_667274.2

Chromosomal Locations for CCDS 21486.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 99735145 99736095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGAGGCTACAACTTGCAATGGGTCAGTAGATGGCTCTACCGTCTTCTACCTGGTGGGCATTCCCTCCC
TGCCAGAGCCCTTCTACCTCCCTGTCTTCTTTCTTTTCCTTCTGTTCTACCTGCTCATCCTGGTGGGGAA
CGCCCTGATCCTGGTGGCTGTGGTGGCCGAGCGCAGCCTCCACAAGCCCATGTACTTCTTCCTAATCAAC
CTCTCGGCTCTAGACATCCTCTTCACCACAACCACTGTCCCGAAGATGCTGTCCCTGCTCCTGCTGGGAG
ACCGCTTCCTCAGTTTCCCTGCCTGCTTATTGCAGATGTATCTGTTCCAAAGCTTTACCTGCTCAGAAGC
CTTCATCCTGGTGGTCATGGCCTATGACCGCTATGTGGCTATCTGCCGCCCTCTGCACTACCCCGTCCAC
ATGACCCCACAGACAAACACTGCACTGGCAGCCAGTGCCTGGATCACCGCCCTCCTCCTGCCTGTCCCAG
CAGTGGTAAAGACCTCTCAGATGGTATATAATGACATTGCCTACATCTACCACTGCTTCTGTGACCACCT
GGCTCTGGTCCAGTCCTCTTGTTCTGACACTACTCCCCAGACGCTCATGGGCTTCTGTATTGCCATGGTG
GTGTCCTTCCTCCCCCTCCTCCTGGTGCTCCTCTCCTATGTGCGAATCCTGACGTCAGTGCTTCGGATCA
ACTCCAAGGAAGGGCGTTCCAAAGCCTTCTCCACCTGCAGTTCCCACCTCCTGGTGGTGGGCACCTACTA
CTCGTCCATTGCCATAGCCTATGTGGCTTACCGAGCTAACCTGCCCTTGGACTTCCACATCATGGGGAAT
GTGGTCTATTCAATTCTCACCCCAATCCTCAACCCTCTCATCTACACTTTGAGGAACAAAGATGTCAAAG
TGGCCATTACCAAAATTGTTTATCTCAAAGGCATGATGTGA

Translation (316 aa):
MEATTCNGSVDGSTVFYLVGIPSLPEPFYLPVFFLFLLFYLLILVGNALILVAVVAERSLHKPMYFFLIN
LSALDILFTTTTVPKMLSLLLLGDRFLSFPACLLQMYLFQSFTCSEAFILVVMAYDRYVAICRPLHYPVH
MTPQTNTALAASAWITALLLPVPAVVKTSQMVYNDIAYIYHCFCDHLALVQSSCSDTTPQTLMGFCIAMV
VSFLPLLLVLLSYVRILTSVLRINSKEGRSKAFSTCSSHLLVVGTYYSSIAIAYVAYRANLPLDFHIMGN
VVYSILTPILNPLIYTLRNKDVKVAITKIVYLKGMM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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