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Report for CCDS21320.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21320.1 Public Mus musculus 7 Gabrg3 23 108 98 CCDS HistoryNCBI Gene:14407Re-query CCDS DB by CCDS ID:21320.1Re-query CCDS DB by GeneID:14407See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21320.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000068911.12 ENSMUSP00000067632.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000068911.12Link to Ensembl Protein Viewer:ENSMUSP00000067632.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000068911Re-query CCDS DB by Protein ID:ENSMUSP00000067632
Original member Current member NCBI NM_008074.3 NP_032100.2 Accepted alive Link to Nucleotide Sequence:NM_008074.3Link to Protein Sequence:NP_032100.2Re-query CCDS DB by Nucleotide ID:NM_008074Re-query CCDS DB by Protein ID:NP_032100Link to BLAST:NP_032100.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032100.2 467 P27681 467 100% 0 0

Chromosomal Locations for CCDS 21320.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 56724413 56724694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56729277 56729336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56729591 56729787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56734947 56735099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56773237 56773374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56982625 56982707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56984943 56985163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 57323648 57323715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 57381589 57381737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 57386721 57386773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1404 nt):
ATGGCTGCAAAGCTGCTGCTTCTCCTCTGCCTGTTCTCGGGCTTGCATGCTCGGTCCAGGAGGGTAGAAG
AAGATGAGAATGAAGACTCCCCATCAAACCAGAAGTGGGTCTTGGCACCCAAATCACAAGACACCGATGT
AACGCTGATTCTCAACAAATTGTTGAGAGAATATGACAAAAAGCTGAGACCGGACATTGGAATAAAACCA
ACTGTGATCGATGTGGACATTTATGTTAACAGCATTGGTCCTGTGTCATCCATAAACATGGAATACCAAA
TTGATATATTTTTTGCTCAAACCTGGACAGACAGTCGCCTTCGATTCAACAGCACAATGAAAATACTAAC
TCTGAACAGCAACATGGTGGGCTTGATATGGATTCCAGACACCATCTTTCGAAATTCTAAAACAGCGGAG
GCTCACTGGATCACCACACCCAACCAGCTCCTCAGAATCTGGAATGATGGGAAAATCCTTTACACATTAA
GGCTCACTATCAATGCAGAGTGCCAGCTGCAACTGCATAACTTCCCTATGGATGCGCATGCCTGCCCCTT
GACCTTCTCTAGCTATGGCTACCCCAAAGAAGAAATGATTTATCGTTGGAGGAAAAATTCAGTTGAGGCA
GCTGATCAGAAATCATGGCGGCTCTATCAGTTTGACTTCATGGGCCTCAGAAACACTACAGAAATCGTGA
CAACATCTGCAGGTGATTATGTTGTCATGACTATCTATTTTGAACTGAGTCGAAGAATGGGATACTTCAC
GATCCAGACGTATATCCCCTGCATACTGACTGTGGTTCTGTCCTGGGTGTCATTTTGGATAAAAAAGGAT
GCGACACCAGCAAGAACAACATTAGGCATCACCACGGTGCTAACCATGACCACACTCAGCACCATTGCCA
GGAAGTCTCTGCCTCGGGTGTCCTATGTCACTGCCATGGACCTCTTTGTGACTGTGTGCTTCTTGTTTGT
CTTTGCCGCACTGATGGAGTATGCTACACTCAACTACTATTCAAGCTGTCGAAAGCCAACCATCAGGAAG
AAAAAAACATCGTTATTACATCCAGATTCCACAAGATGGATTCCTGATCGAATAAGCCTTCAAGCACCCT
CTAATTACTCTCTACTGGACATGAGGCCCCCACCACCTGTGATGATCACGTTAAACAATTCCATGTACTG
GCAGGAATTTGAGGACACCTGTGTCTATGAGTGTCTGGATGGCAAAGACTGCCAGAGCTTCTTCTGCTGC
TATGAGGAGTGCAAGTCTGGCTCCTGGAGGAGAGGCCGCATCCACATTGATGTCTCTGAGCTGGACTCCT
ACTCTCGGGTCTTCTTCCCGACATCCTTCCTGCTGTTCAACCTGGTCTATTGGGTTGGATACCTGTATCT
TTAA

Translation (467 aa):
MAAKLLLLLCLFSGLHARSRRVEEDENEDSPSNQKWVLAPKSQDTDVTLILNKLLREYDKKLRPDIGIKP
TVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTDSRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAE
AHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPMDAHACPLTFSSYGYPKEEMIYRWRKNSVEA
ADQKSWRLYQFDFMGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKD
ATPARTTLGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCRKPTIRK
KKTSLLHPDSTRWIPDRISLQAPSNYSLLDMRPPPPVMITLNNSMYWQEFEDTCVYECLDGKDCQSFFCC
YEECKSGSWRRGRIHIDVSELDSYSRVFFPTSFLLFNLVYWVGYLYL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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