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Report for CCDS21075.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21075.1 Public Mus musculus 7 Zfp30 23 108 98 CCDS HistoryNCBI Gene:22693Re-query CCDS DB by CCDS ID:21075.1Re-query CCDS DB by GeneID:22693See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21075.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032803.11 ENSMUSP00000032803.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032803.11Link to Ensembl Protein Viewer:ENSMUSP00000032803.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000032803Re-query CCDS DB by Protein ID:ENSMUSP00000032803
Original member Current member NCBI NM_013705.2 NP_038733.1 Accepted alive Link to Nucleotide Sequence:NM_013705.2Link to Protein Sequence:NP_038733.1Re-query CCDS DB by Nucleotide ID:NM_013705Re-query CCDS DB by Protein ID:NP_038733Link to BLAST:NP_038733.1

Chromosomal Locations for CCDS 21075.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 29786250 29786303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29788049 29788175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29789338 29789436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29792360 29793726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1647 nt):
ATGATCCTCGAGGAAGAACAAGCCAGTTCTTGCGATTCTGGAATCATGGCTCATAGTACGGTGATGTTCA
GAGATGTGGCTGTGGGCTTTTCTCAGGAAGAGTGGGAGTGCCTGAGTGCCTACGAGAGGGATCTGTACAG
AGATGTGATGCTAGAGAACTACAGCCACTTGGTGTCACTGGCAGGATGTTCCATTTCTAAGCCAGATGTG
ATCACCCTGTTGGAACAAGGGAAGGAGCCGTGGATGATTGTGAGGGCTGAGAAGAGAAGGTGGAGCCGAG
ATCTGGAATCCAGATACAGCAGTAACGGGTTACTTCCAGAAAAGAATACTTACGAAATTAATCTATCTCC
GTGGGAAATAATGGGAAGAATTCAAAGGCGTGGCCCCGAAGACTCCCTTTTGGGGAAAGACTTTGAATAT
AAAATATATGAAGAACAAGAGAACTCTCATAGGGTATATTTCAGACACGTGATAAAAACCACCTCTGGAA
AAAGACCTCGGTACAGAAAACGCACACCTGTTAGTCTCTATCAGAAAACTCCTAACGGAGAAAAGCCCTA
CGAATGTGGGGAGTGTGGGAAGGCTTTCAAAGTCCGCCAACAACTTACTTTCCATCAGAGGATCCACACC
GGCGAGAAGCCCTACGAATGCAAGGAATGTGGCAAAGCCTTCCGACAGTGCGCCCACCTCAGTCGCCATC
AGAGGATCCACGCCTCTGACAAGCTCTATGAATGTAAGAAGTGTGCAAAGATCTTCACGTGTAGCTCGGA
CCTTCGAGGGCATCAGAGGTCTCACGTGGGCGAGAAGCCCTACGATTGTAAAGAGTGCGGGAAGGCCTTT
CGAGTCCGTGGACAGCTCATGCTCCACCAGAGGATCCACACCGGTGAGAAGCCCTACGCATGCACGGAGT
GCGGCAAGAGCTTCCGGCAGGTAGCGCACCTCACTCGGCATCAGAGGCTCAACAGTGGCAGCTCACGCCA
CGAGTGTAAGGAGTGCGGCCGGGCTTTCCTGTGCAGCACGGGCCTCCGGCTGCATCACAAACTGCACACG
GGAGAGAAACCCTACGACTGCAAGGAGTGTGGGAAGGCGTTCCGGGTGAGGCAGCAGCTCACCCTGCACG
AGAGGATCCACACCGGCGAGAAGCCCTTCGACTGCAAGGAGTGCGGGAAGACCTTCAGCCGCGGCTACCA
TCTCACCCTCCACCAGAGGATCCACACTGGGGAGAAGCCTTACGAGTGTAAGGAGTGCCGCAAGTTCTTC
CGCCGGTACTCGGAGCTCATTTCCCACCAGGGCATTCACATCGGGGAGAAACCCTATGACTGCAAGGAGT
GCGGAAAGGCTTTTAGGCTGTTCTCCCAGCTGACTCAGCACCAGAGCATTCATTTTGGTGAGAAGCCCTA
TAAATGTATGGAATGTGAGAAGACTTTCAGACTCCTCTCACAACTGACGCAGCATCAGAGCATTCACACG
GGCGAGAAGCCTTACGATTGTAAGGAGTGCGGGAAAGCCTTTCGCCTCCACTCGTCTCTCATTCAGCACC
AGAGAATCCACTCTGGCGAGAAGCCGTACAAATGTACGGAGTGTAAGAAGGCCTTCCGTCAACACTCACA
CCTCACCTACCATCAGCGAATTCATAAGAATTTGTAA

Translation (548 aa):
MILEEEQASSCDSGIMAHSTVMFRDVAVGFSQEEWECLSAYERDLYRDVMLENYSHLVSLAGCSISKPDV
ITLLEQGKEPWMIVRAEKRRWSRDLESRYSSNGLLPEKNTYEINLSPWEIMGRIQRRGPEDSLLGKDFEY
KIYEEQENSHRVYFRHVIKTTSGKRPRYRKRTPVSLYQKTPNGEKPYECGECGKAFKVRQQLTFHQRIHT
GEKPYECKECGKAFRQCAHLSRHQRIHASDKLYECKKCAKIFTCSSDLRGHQRSHVGEKPYDCKECGKAF
RVRGQLMLHQRIHTGEKPYACTECGKSFRQVAHLTRHQRLNSGSSRHECKECGRAFLCSTGLRLHHKLHT
GEKPYDCKECGKAFRVRQQLTLHERIHTGEKPFDCKECGKTFSRGYHLTLHQRIHTGEKPYECKECRKFF
RRYSELISHQGIHIGEKPYDCKECGKAFRLFSQLTQHQSIHFGEKPYKCMECEKTFRLLSQLTQHQSIHT
GEKPYDCKECGKAFRLHSSLIQHQRIHSGEKPYKCTECKKAFRQHSHLTYHQRIHKNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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