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Report for CCDS21067.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21067.1 Public Mus musculus 7 Ggn 23 108 98 CCDS HistoryNCBI Gene:243897Re-query CCDS DB by CCDS ID:21067.1Re-query CCDS DB by GeneID:243897See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21067.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033886.7 ENSMUSP00000033886.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033886.7Link to Ensembl Protein Viewer:ENSMUSP00000033886.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000033886Re-query CCDS DB by Protein ID:ENSMUSP00000033886
Original member Current member NCBI NM_182696.3 NP_874355.1 Accepted alive Link to Nucleotide Sequence:NM_182696.3Link to Protein Sequence:NP_874355.1Re-query CCDS DB by Nucleotide ID:NM_182696Re-query CCDS DB by Protein ID:NP_874355Link to BLAST:NP_874355.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_874355.1 137 Q80WJ1-3 137 100% 0 0

Chromosomal Locations for CCDS 21067.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 29172805 29173100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29173756 29173873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (414 nt):
ATGCCCCAACCCAAGACTCGTACACGCAGGAACAAAGGTCCCCGAGCGGCCCGGGGTGTTATCCGTGAAG
AAGGGACTTCTGGAGATGGCCCTCGAGAACCGAATACGGCTCCGGTGACTGACAGCAGCAGTGGAGGGGG
TGGCGGTGGTAGCAACGGAACCTCCACAGCTGGGGCCTCTAACAAGGGAACAGCAAGGCACTGGCCGCCT
TTCGAGGTGCTTAATTCCTGTCCCTGCAAGTGCTACTGCCGCCATCAACGTCGTCACCGTCGGCTGCCAC
GCAACGTGTCTGCCTGGCTGAGCACACCTACCAACCACCTGAGCGAGCCACCGTGGGTGGCCACTGTCAA
GCTGGCTGGCTCCCTAGTAGCGGGCCTGGAGCACTACGACTTGCAGGCCACCCATTCTACCTGA

Translation (137 aa):
MPQPKTRTRRNKGPRAARGVIREEGTSGDGPREPNTAPVTDSSSGGGGGGSNGTSTAGASNKGTARHWPP
FEVLNSCPCKCYCRHQRRHRRLPRNVSAWLSTPTNHLSEPPWVATVKLAGSLVAGLEHYDLQATHST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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