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Report for CCDS20915.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20915.1 Public Mus musculus 7 Ceacam19 23 108 98 CCDS HistoryNCBI Gene:319930Re-query CCDS DB by CCDS ID:20915.1Re-query CCDS DB by GeneID:319930See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20915.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052605.7 ENSMUSP00000057433.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052605.7Link to Ensembl Protein Viewer:ENSMUSP00000057433.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000052605Re-query CCDS DB by Protein ID:ENSMUSP00000057433
Original member Current member NCBI NM_177036.5 NP_796010.1 Accepted alive Link to Nucleotide Sequence:NM_177036.5Link to Protein Sequence:NP_796010.1Re-query CCDS DB by Nucleotide ID:NM_177036Re-query CCDS DB by Protein ID:NP_796010Link to BLAST:NP_796010.1

Chromosomal Locations for CCDS 20915.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 19878127 19878180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19878829 19878891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19881814 19881899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19882575 19882621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19882802 19882946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19886284 19886652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19887754 19887805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (816 nt):
ATGGAGACCTGGACCCCACCGGGCTGCTTCTCAAAGGGCCTCCTGTTCTCAGCCTTGTTCCTGGCCCTTG
AGCTGCCCCAAGGCTCACAGGCAGCCCTCCACATCGAGATGATCCCAGAGCAGCCTCAAAAGAACCAGGA
CCTTCTTCTGTCCCTTCACGGTGTTCCCAGCACTGCTCAGGATTTCATCTGGTACCTGGGGGAGGAGGCT
TCTGGAGGCACAAGGCTGTTCTCTTATATCCCCGGACTACCACGGCCCCAGAGGGATGGCAGTGCCATGG
GACAGCGAGACATTGTTGGCTTCCCAAATGGTTCCATGCTGCTTCGAAATGCCCAACCTTCAGATAGTGG
CACCTATCAGGTGGCCGCCACCATGAACCCTGCCTGGACAATGAAGGCCAAGATTAACGTCCATGTAGCT
GGTGCACGCGAGGTCTCCTCACTCCTCCCTGTCCATGCCGGGATCACGGTAGCCATCATCATTGGGAGTC
TTGCTATCGGGTCACTACTTGTATGTGGCATTGCCTATGTCCTGGTCACTCGAAGCCGGAAGGGCCGGAG
CCCCAGGAATCCAGCCACAGAGAAGCCAGAAGTGAACCTGAGTCCTGAATCTGGTGACAGCAACATCTAT
GAAGTGATGCCATCTCCAGTCTTCCTGGTGTCTCCCATCAGTGACATGGAGCAAGGAAGCCCACCCATGA
GTCAGCCTCCACCACCTCCACCAGCATCTCAGGAGCCAGAGCCAGAGCACCAGCACTATCAGGACCTACT
AAACCCTGACCCAGCCCCATACTGCCAGCTGGTGCCAACTTCCTGA

Translation (271 aa):
METWTPPGCFSKGLLFSALFLALELPQGSQAALHIEMIPEQPQKNQDLLLSLHGVPSTAQDFIWYLGEEA
SGGTRLFSYIPGLPRPQRDGSAMGQRDIVGFPNGSMLLRNAQPSDSGTYQVAATMNPAWTMKAKINVHVA
GAREVSSLLPVHAGITVAIIIGSLAIGSLLVCGIAYVLVTRSRKGRSPRNPATEKPEVNLSPESGDSNIY
EVMPSPVFLVSPISDMEQGSPPMSQPPPPPPASQEPEPEHQHYQDLLNPDPAPYCQLVPTS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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