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Report for CCDS20633.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20633.1 Public Mus musculus 6 Tas2r140 23 108 98 CCDS HistoryNCBI Gene:387616Re-query CCDS DB by CCDS ID:20633.1Re-query CCDS DB by GeneID:387616See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20633.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000095391.2 ENSMUSP00000093040.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000095391.2Link to Ensembl Protein Viewer:ENSMUSP00000093040.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000095391Re-query CCDS DB by Protein ID:ENSMUSP00000093040
Original member Current member NCBI NM_021562.1 NP_067537.1 Accepted alive Link to Nucleotide Sequence:NM_021562.1Link to Protein Sequence:NP_067537.1Re-query CCDS DB by Nucleotide ID:NM_021562Re-query CCDS DB by Protein ID:NP_067537Link to BLAST:NP_067537.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067537.1 312 Q7TQA4 312 100% 0 0

Chromosomal Locations for CCDS 20633.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 133054855 133055793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGAATGCTACTGTGAAGTGTACATTATTAATCATCTTAGGTGTAGAAATCATTATAGGGTGTTTAGGAA
ATGGATTCATAGCTGTGGTGAACATTATGGACTGGGCCAAGAGAAGAAAGATCTCCTTAGTGGATCAGAT
ATTCACTGCTCTGGCCATCTCCAGACTTGCTTTTGTGTGGTCACTACTCACAGTTTTATTCACATCTGAG
CTGTACTCAGCATTAATGACAACAAGAAAAGTGTTGATAATATTTAATAATTCCTGGACAGTGATCAATC
ATTTCAATATTTGGCTTGCTACATGTCTCAGCATCTTTTATTTTCTCATGATAGCTAATTTTTCAAATTC
TATTTTTCTTTCCCTAAGGTGGAGGGTAAAAACTGTGGTTTCAGTAACACTATTGATGTCACTTCTCCTC
TTGTTTGTAAACGTTTTAGTCATAAACACATTTATTGTTATCTCAGTTGATGTATATAAAGTAAATACGT
CCTACAGTTCTCATTCAGATAACAATATACATATTTCTAGGATTTTTTTATTTACCAACACTATATTCAC
ATTCATACCCTTCAGTGTGACGCTGACAATTTTTCTCCTGCTCATCTTCTCACTATGGACTCATCTGAAG
AACATGCAACACAATGCCAAAGACTCCAGAGACCCCAGCACCACAGCCCATATTAAGGCCCTGCAAATGA
TGGTCACCTTTCTCTTATTATACACCATTTTCTTTCTGGCACTTGTCATGCAATCTTCAAAAATGAAGTT
TCTTTCGAGCACTGTGTTCAATTATTTTTTTGAGGTTATATCACTTGCTTTTCCTTCGGGCCACTCTTGT
GTCCTAATTCTGGGAAATTCTAAGCTCAGACAGACTTTTATATCCACAGTATGGTGGCTGAAGTCCAGTT
TTAATGCTGCAGAACTCCCAGGTCCTTAG

Translation (312 aa):
MNATVKCTLLIILGVEIIIGCLGNGFIAVVNIMDWAKRRKISLVDQIFTALAISRLAFVWSLLTVLFTSE
LYSALMTTRKVLIIFNNSWTVINHFNIWLATCLSIFYFLMIANFSNSIFLSLRWRVKTVVSVTLLMSLLL
LFVNVLVINTFIVISVDVYKVNTSYSSHSDNNIHISRIFLFTNTIFTFIPFSVTLTIFLLLIFSLWTHLK
NMQHNAKDSRDPSTTAHIKALQMMVTFLLLYTIFFLALVMQSSKMKFLSSTVFNYFFEVISLAFPSGHSC
VLILGNSKLRQTFISTVWWLKSSFNAAELPGP


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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