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Report for CCDS20223.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20223.1 Public Mus musculus 6 Eif2ak3 23 108 98 CCDS HistoryNCBI Gene:13666Re-query CCDS DB by CCDS ID:20223.1Re-query CCDS DB by GeneID:13666See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20223.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034093.14 ENSMUSP00000034093.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034093.14Link to Ensembl Protein Viewer:ENSMUSP00000034093.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000034093Re-query CCDS DB by Protein ID:ENSMUSP00000034093
Original member Current member NCBI NM_010121.3 NP_034251.2 Accepted alive Link to Nucleotide Sequence:NM_010121.3Link to Protein Sequence:NP_034251.2Re-query CCDS DB by Nucleotide ID:NM_010121Re-query CCDS DB by Protein ID:NP_034251Link to BLAST:NP_034251.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034251.2 1114 Q9Z2B5 1114 99.9102% 0 1

Chromosomal Locations for CCDS 20223.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 70844726 70845021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 70858387 70858516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 70876678 70876872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 70878835 70878968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 70881484 70881718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 70882265 70882427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 70883595 70883735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 70884770 70884892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 70885161 70885381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 70887800 70887912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 70889475 70889597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 70890065 70890214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 70892355 70893141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 70896916 70897083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 70900232 70900333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 70901405 70901467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 70904088 70904288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3345 nt):
ATGGAGCGCGCCACCCGGCCCGGGCCGCGCGCGCTGCTGCTGCTTCTGTTCCTGCTGCTGGGCTGCGCGG
CGGGGATCTCGGCGGTCGCGCCCGCCCGCAGTTTGCTTGCTCCCGCGTCGGAGACAGTGTTTGGCTTAGG
GGCAGCGGCCGCCCCGACTTCGGCCGCGCGGGTGCCTGCGGTGGCAACGGCCGAAGTGACCGTGGAGGAC
GCCGAGGCATTGCCGGCTGCCGCTGGCGAACCGGAGTCACGCGCGACGGAGCCCGATGACGACGTGGAAC
TGCGGCCTCGCGGCAGGTCCTTGGTAATCATCAGCACTTTAGATGGACGAATCGCTGCACTGGATGCCGA
GAATGATGGGAAAAAGCAGTGGGATTTGGACGTGGGGTCTGGTTCCTTGGTTTCATCTAGCCTCAGCAAG
CCAGAGGTGTTTGGGAACAAGATGATCATCCCCTCCCTGGATGGAGACCTCTTCCAGTGGGACCGGGACC
GAGAGAGCATGGAGGCCGTCCCCTTCACGGTGGAGTCCCTGCTCGAATCTTCCTACAAGTTTGGAGATGA
TGTTGTTCTGGTTGGAGGGAAATCTCTGACTACATACGGACTCAGTGCTTACAGTGGAAAGCTGAGGTAT
ATCTGTTCTGCCTTGGGATGTCGCCGATGGGATAGTGATGAAATGGAAGAAGAGGAAGACATCTTGCTTC
TGCAGCGTACGCAGAAGACTGTGCGAGCTGTCGGGCCTCGAAGCGGCAGTGAGAAGTGGAATTTCAGTGT
TGGCCACTTTGAACTTCGGTATATTCCAGACATGGAAACTAGAGCCGGATTCATTGAAAGCACCTTTAAA
CCGGGTGGAAACAAAGAAGACTCTAAAATTATTTCAGATGTGGAAGAACAAGAAGCCACCATGCTGGACA
CAGTGATAAAAGTTTCCGTTGCTGATTGGAAGGTCATGGCGTTTAGTAGGAAGGGAGGCCGCCTGGAATG
GGAGTACCAGTTTTGTACTCCCATCGCGTCCGCCTGGCTGGTGAGGGATGGCAAGGTCATCCCCATCAGC
CTGTTTGATGATACAAGTTACACAGCCAGCGAAGAAGCCTTGGGAGACGAAGAAGACATTGTAGAGGCTG
CTCGGGGAGCCACAGAGAACAGCGTGTACTTAGGGATGTACAGAGGCCAGCTGTACCTGCAGTCGTCCGT
CAGGGTCTCAGAAAAGTTCCCTACAAGCCCAAAGGCCTTGGAGTCTGTAAATGGCGAAAATGCAATTATT
CCTCTGCCGACGATCAAATGGAAGCCCTTAATCCATTCTCCTTCTAGGACTCCTGTCTTGGTTGGGTCTG
ATGAATTTGACAAATGTCTAAGTAATGATAAGTATTCCCACGAAGAATACAGTAATGGTGCACTTTCAAT
CCTCCAGTATCCATACGATAACGGTTACTATCTGCCATACTACAAGAGAGAAAGGAATAAGCGGAGCACG
CAGATCACAGTCAGGTTCCTGGACAGCCCCCACTACAGCAAGAACATCCGCAAGAAGGACCCTATCCTCC
TGCTGCACTGGTGGAAGGAGATATTCGGGACGATCCTGCTTTGCATCGTAGCCACGACCTTCATCGTGCG
CAGGCTTTTCCATCCTCAGCCCCACAGGCAGCGGAAGGAGTCTGAAACTCAGTGCCAGACTGAAAGTAAA
TACGACTCCGTGAGTGCCGATGTCAGTGACAACAGCTGGAATGACATGAAGTACTCAGGATACGTATCCC
GATATCTAACAGATTTTGAGCCAATTCAGTGCATGGGTCGTGGTGGCTTTGGCGTTGTCTTTGAAGCTAA
AAACAAAGTAGATGACTGCAATTACGCTATCAAGAGGATCCGGCTCCCCAACAGGGAGTTGGCACGGGAG
AAGGTAATGCGGGAAGTTAAAGCCTTGGCTAAGCTGGAACACCCAGGCATTGTGAGGTATTTCAACGCCT
GGCTGGAAACCCCACCAGAGAAGTGGCAAGAAGAGATGGATGAGATCTGGCTCAAAGACGAAAGCACAGA
CTGGCCGCTCAGCTCCCCTAGCCCGATGGATGCCCCATCTGTTAAGATCCGAAGGATGGATCCTTTCTCT
ACAAAAGAGCAGATCGAAGTCATAGCTCCTTCTCCTGAAAGAAGTCGGTCTTTCTCGGTGGGCATTTCCT
GTGGCCAGACAAGCTCATCGGAGAGCCAGTTCTCTCCCCTGGAGTTCTCAGGGACAGACTGCGGAGACAA
CAGTGACTCAGCGGACGCAGCCTACAACCTCCAGGACAGTTGCCTGACGGACTGCGAGGACGTGGAAGAT
GGCACCGTGGACGGCAATGACGAGGGACACTCCTTTGAACTTTGTCCGTCCGAAGCTTCTCCCTATACCC
GGTCAAGGGAAGGAACGTCCTCCTCCATAGTGTTTGAGGACTCTGGCTGCGGCAACGCGTCCAGTAAGGA
GGAGCCCAGAGGGAACCGGCTGCATGATGGCAACCATTATGTTAATAAGCTAACTGATCTCAAGTGCTCC
AGCAGCAGGTCTTCTTCAGAAGCCACCACCTTGTCTACCTCCCCTACCAGGCCAACCACTCTAAGCTTGG
ATTTCACCAAGAACACTGTGGGCCAGCTCCAGCCCAGCTCCCCCAAGGTGTATCTGTACATTCAGATGCA
GCTGTGCAGGAAGGAGAACCTCAAAGACTGGATGAACCGGCGCTGCAGCTTGGAGGACCGGGAGCACGGC
GTGTGCCTGCACATCTTCCTGCAGATCGCAGAGGCAGTGGAGTTCCTGCACAGCAAGGGACTCATGCACA
GGGACCTCAAGCCTTCCAACATATTCTTCACAATGGATGATGTGGTCAAGGTTGGGGACTTTGGACTGGT
GACTGCTATGGACCAAGATGAAGAAGAGCAGACTGTACTGACTCCAATGCCAGCCTATGCTACGCACACG
GGACAAGTAGGGACCAAGCTATACATGAGCCCAGAGCAGATTCATGGAAACAACTACTCCCATAAAGTGG
ACATCTTCTCTTTAGGCTTGATTCTGTTTGAACTCCTCTACCCATTCAGCACCCAGATGGAACGAGTCCG
GATTTTAACTGATGTCAGAAATCTCAAGTTTCCTCTACTGTTCACTCAGAAATATCCCCAAGAGCATATG
ATGGTTCAAGACATGCTCTCTCCATCCCCCACGGAGCGGCCTGAAGCCACAGACATCATTGAAAATGCCA
TATTTGAGAACTTGGAGTTTCCCGGGAAAACGGTTCTGAGACAGCGGTCCCGCTCCATGAGTTCATCTGG
AACAAAACATTCCAGACAGCCCAGCTGCTCGTACAGCCCACTGCCTGGCAACTAG

Translation (1114 aa):
MERATRPGPRALLLLLFLLLGCAAGISAVAPARSLLAPASETVFGLGAAAAPTSAARVPAVATAEVTVED
AEALPAAAGEPESRATEPDDDVELRPRGRSLVIISTLDGRIAALDAENDGKKQWDLDVGSGSLVSSSLSK
PEVFGNKMIIPSLDGDLFQWDRDRESMEAVPFTVESLLESSYKFGDDVVLVGGKSLTTYGLSAYSGKLRY
ICSALGCRRWDSDEMEEEEDILLLQRTQKTVRAVGPRSGSEKWNFSVGHFELRYIPDMETRAGFIESTFK
PGGNKEDSKIISDVEEQEATMLDTVIKVSVADWKVMAFSRKGGRLEWEYQFCTPIASAWLVRDGKVIPIS
LFDDTSYTASEEALGDEEDIVEAARGATENSVYLGMYRGQLYLQSSVRVSEKFPTSPKALESVNGENAII
PLPTIKWKPLIHSPSRTPVLVGSDEFDKCLSNDKYSHEEYSNGALSILQYPYDNGYYLPYYKRERNKRST
QITVRFLDSPHYSKNIRKKDPILLLHWWKEIFGTILLCIVATTFIVRRLFHPQPHRQRKESETQCQTESK
YDSVSADVSDNSWNDMKYSGYVSRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELARE
KVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFS
TKEQIEVIAPSPERSRSFSVGISCGQTSSSESQFSPLEFSGTDCGDNSDSADAAYNLQDSCLTDCEDVED
GTVDGNDEGHSFELCPSEASPYTRSREGTSSSIVFEDSGCGNASSKEEPRGNRLHDGNHYVNKLTDLKCS
SSRSSSEATTLSTSPTRPTTLSLDFTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG
VCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHT
GQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYPFSTQMERVRILTDVRNLKFPLLFTQKYPQEHM
MVQDMLSPSPTERPEATDIIENAIFENLEFPGKTVLRQRSRSMSSSGTKHSRQPSCSYSPLPGN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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