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Report for CCDS19996.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19996.1 Public Mus musculus 6 Tmem140 23 108 98 CCDS HistoryNCBI Gene:68487Re-query CCDS DB by CCDS ID:19996.1Re-query CCDS DB by GeneID:68487See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19996.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074949.3 ENSMUSP00000074482.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074949.3Link to Ensembl Protein Viewer:ENSMUSP00000074482.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000074949Re-query CCDS DB by Protein ID:ENSMUSP00000074482
Original member Current member NCBI NM_001368365.1 NP_001355294.1 Accepted alive Link to Nucleotide Sequence:NM_001368365.1Link to Protein Sequence:NP_001355294.1Re-query CCDS DB by Nucleotide ID:NM_001368365Re-query CCDS DB by Protein ID:NP_001355294Link to BLAST:NP_001355294.1
Original member Current member NCBI NM_197986.3 NP_932103.1 Accepted alive Link to Nucleotide Sequence:NM_197986.3Link to Protein Sequence:NP_932103.1Re-query CCDS DB by Nucleotide ID:NM_197986Re-query CCDS DB by Protein ID:NP_932103Link to BLAST:NP_932103.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001355294.1 185 Q8BGY5 185 100% 0 0
NP_932103.1 185 Q8BGY5 185 100% 0 0

Chromosomal Locations for CCDS 19996.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 34872551 34873108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (558 nt):
ATGGCCTTCTCCAGGCTGTGGCGGAACAACCACCTGCCCTTCGTGGGCATCATGATCCTCTTGGCCGCGG
CCCTGTGCCTGATGTTCTACGCTCTCCTCTGGAAGGCTGGCAACCTCGCTGACCTACCTAGCCTGAGAAT
CGGCTTCTACAACTTCTGTCTGTGGAAGGAGGACATGGGCTCCCTAGCATGTTACAACTTTCCCGAGCTG
GACGTGCTGGGCATTCCTCAGGTTGGACTAGCCCTGGCCAGGCTCGGTGTGTATGGAGCCCTGGTCCTCA
CAGTGTTCGTCCCTCTGCCTCTCCTCCTTGCCCAGTACAACAGAGATGAGGGAGAGTGGCGGCTGGCCGT
GTGCTTCCTGGCGGCATCCTCCATTCTGTTGGCCGGAGGACTAAGCCTCTTCCTCTCCTTCGTGTGGAAG
TGGCTCAGGCTCTCCTTCCTGGGGCCTGCCTTGCCAGCTCTATGCCTAGCCCAGCTGTTACTCATCTTCT
TGCTTGTGGCCACGGTTAGGTTCCCGCCACGGGATAAGGAGGACAAGAACCAGTGGGAGAACTGTTAG

Translation (185 aa):
MAFSRLWRNNHLPFVGIMILLAAALCLMFYALLWKAGNLADLPSLRIGFYNFCLWKEDMGSLACYNFPEL
DVLGIPQVGLALARLGVYGALVLTVFVPLPLLLAQYNRDEGEWRLAVCFLAASSILLAGGLSLFLSFVWK
WLRLSFLGPALPALCLAQLLLIFLLVATVRFPPRDKEDKNQWENC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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