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Report for CCDS1973.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1973.1 Public Homo sapiens 2 ELMOD3 24 110 108 CCDS HistoryNCBI Gene:84173Re-query CCDS DB by CCDS ID:1973.1Re-query CCDS DB by GeneID:84173See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 1973.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000315658.11 ENSP00000318264.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000315658.11Link to Ensembl Protein Viewer:ENSP00000318264.7Re-query CCDS DB by Nucleotide ID:ENST00000315658Re-query CCDS DB by Protein ID:ENSP00000318264
Current member NCBI NM_032213.5 NP_115589.2 Accepted alive Link to Nucleotide Sequence:NM_032213.5Link to Protein Sequence:NP_115589.2Re-query CCDS DB by Nucleotide ID:NM_032213Re-query CCDS DB by Protein ID:NP_115589Link to BLAST:NP_115589.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115589.2 391 Q96FG2-6 391 100% 0 0

Chromosomal Locations for CCDS 1973.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 85357199 85357252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85362186 85362260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85363097 85363166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85368686 85368754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85369739 85369830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85371086 85371209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85371440 85371562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85377344 85377474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85389751 85389827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85390138 85390498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1176 nt):
ATGAATGAAAAATCTTGCTCTTTCCATAGTAAAGAAGAATTAAGAGATGGACAGGGTGAAAGATTGTCTG
CTGGATATTCTCCATCATATGACAAGGACAAGAGTGTTCTGGCTTTCAGAGGAATCCCTATCTCAGAGTT
GAAGAACCATGGCATTCTCCAGGCTCTGACCACAGAAGCTTATGAATGGGAGCCACGTGTTGTGAGTACA
GAGGTGGTCAGAGCCCAAGAAGAATGGGAAGCTGTGGACACCATCCAGCCAGAGACAGGGAGCCAAGCTA
GCTCAGAGCAGCCTGGGCAGCTAATCTCCTTCAGTGAGGCCCTGCAGCACTTCCAGACTGTGGACCTTTC
CCCCTTCAAGAAAAGAATCCAGCCAACTATTCGAAGGACTGGGCTCGCCGCCCTCCGACACTACCTCTTC
GGGCCTCCAAAGCTCCACCAGCGCCTTCGGGAAGAAAGGGACTTGGTCCTGACCATTGCTCAGTGTGGCC
TGGATAGCCAAGACCCAGTGCATGGCCGAGTCCTCCAGACCATCTATAAGAAGCTGACCGGCTCCAAGTT
TGACTGTGCCCTTCATGGAAACCACTGGGAGGACCTGGGCTTTCAGGGAGCGAATCCAGCCACAGACCTG
AGAGGCGCAGGCTTCCTTGCCCTCCTGCATCTGCTCTACCTGGTGATGGACTCAAAGACCTTGCCGATGG
CGCAGGAGATTTTCCGCCTGTCTCGTCACCACATCCAGCAATTCCCTTTCTGTTTGATGTCCGTGAACAT
CACCCACATTGCCATCCAGGCCTTGAGAGAGGAGTGTCTCTCCAGAGAGTGTAATCGGCAGCAGAAGGTC
ATCCCCGTGGTGAACAGCTTCTATGCCGCCACATTCCTCCACCTCGCACATGTCTGGAGGACACAGCGGA
AGACCATCTCAGACTCGGGCTTTGTCCTCAAAGGTGTGCTCTTTCTTCTGGGGAGGCCTAGGCTGAATGC
ACAGTGTCCCAGGTCCAGAGAGCCCAAGGTGGTTGCTAGACTGGTTTTGGCTGCAGTTCTTCCCCATCCA
CACTTTCTCAAATTCCAGCTTACCAAAATCTCCATCACCCACCCCCTGGAGTCTGCTAGTTCTCCTTTCT
CTGCCCTGACTGTCGCCCTTTTCTGGTCTTATACTTATGACAAGCATATATTCTGA

Translation (391 aa):
MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPISELKNHGILQALTTEAYEWEPRVVST
EVVRAQEEWEAVDTIQPETGSQASSEQPGQLISFSEALQHFQTVDLSPFKKRIQPTIRRTGLAALRHYLF
GPPKLHQRLREERDLVLTIAQCGLDSQDPVHGRVLQTIYKKLTGSKFDCALHGNHWEDLGFQGANPATDL
RGAGFLALLHLLYLVMDSKTLPMAQEIFRLSRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKV
IPVVNSFYAATFLHLAHVWRTQRKTISDSGFVLKGVLFLLGRPRLNAQCPRSREPKVVARLVLAAVLPHP
HFLKFQLTKISITHPLESASSPFSALTVALFWSYTYDKHIF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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