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Report for CCDS18989.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18989.1 Public Mus musculus 4 Espn 23 108 98 CCDS HistoryNCBI Gene:56226Re-query CCDS DB by CCDS ID:18989.1Re-query CCDS DB by GeneID:56226See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18989.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030785.14 ENSMUSP00000030785.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030785.14Link to Ensembl Protein Viewer:ENSMUSP00000030785.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000030785Re-query CCDS DB by Protein ID:ENSMUSP00000030785
Original member Current member NCBI NM_207687.3 NP_997570.1 Accepted alive Link to Nucleotide Sequence:NM_207687.3Link to Protein Sequence:NP_997570.1Re-query CCDS DB by Nucleotide ID:NM_207687Re-query CCDS DB by Protein ID:NP_997570Link to BLAST:NP_997570.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997570.1 871 Q9ET47-1 871 100% 0 0

Chromosomal Locations for CCDS 18989.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 152121121 152121265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152123617 152123628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152123714 152123793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152128069 152128332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152128408 152128553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152129612 152129638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152130769 152130961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152131052 152131294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152132924 152132956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152134161 152134441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152135473 152135674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152138430 152138561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152138736 152138918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152139039 152139225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152148859 152149052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152151914 152152207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2616 nt):
ATGGCCCTGGAGCAGGCGCTGCAGGCGGCACGGCGGGGCGACCTGGACGTGCTGAGGTCCCTGCACGCCG
CCGGCCTGCTGGGGCCTTCTCTGCGCGACTCGCTAGACGCCCTGCCGGTGCACCATGCGGCCCGCTCAGG
CAAGCTGCACTGTCTGCGCTACTTGGTGGAGGAGGTTGCCCTCCCAGCCGTGTCCCGCGCGCGCAACGGC
GCCACACCAGCCCATGACGCCGCCGCCACAGGCTACCTCTCTTGCCTGCAGTGGCTGCTCACACAGGGTG
GCTGCAGGGTGCAGGAAAAAGATAACTCTGGTGCCACAGTCCTGCATCTGGCTGCCCGCTTTGGCCACCC
GGATGTGGTGAAGTGGCTGCTGTACCAGGGCGGTGCAAATTCGGCCATCACCACAGACACGGGCGCCCTG
CCTATCCACTACGCTGCCGCCAAAGGAGACCTCCCCTCGCTGAAGCTTCTGGTCGGGCATTACCCTGAGG
GAGTGAATGCCCAAACCAACAACGGTGCCACGCCCCTGTACCTGGCGTGCCAGGAGGGCCACCTGGAAGT
GACGAAGTACCTTGTGCAGGAGTGCAGTGCAGATCCGCACCTGCGCGCCCAAGACGGCATGACACCCCTA
CATGCCGCAGCACAGATGGGCCACAACCCAGTCTTGGTGTGGCTGGTGAGCTTTGCAGACGTTAGCTTTT
CAGAGCAGGACCACGACGGCGCCACGGCCATGCACTTTGCTGCCAGTCGCGGCCACACCAAAGTGCTCAG
CTGGCTCCTGCTGCACGGGGCAGAGATCTCGCAGGACCTGTGGGGCGGAACCCCGCTGCATGACGCTGCT
GAGAACGGGGAACTGGAGTGCTGCCAGATCCTCGCGGTGAACGGCGCTGGGCTGGACGTCCGCGACCACG
ATGGGTACACCGCTGCCGACCTGGCAGAGTTCAATGGCCACACCCACTGTTCCCGCTACCTACGTACGGT
GCAAACCCTGAGCTTGGAACACCGAGTCTTGTCCCGGGATCAATCCATGGACCTGGAGGCAAAGCAGCTG
GACTCGGGTATGTCCTCGCCCAACACCACCATGTCGGTCCAGCCAATGACCTTTGACCTGGGCTCGCCTA
CTAGCACGTTCTCCAACTATGACTCCTGCTCCTCCAGTCACTCCAGCAGCAAGGGGCAGCGATCGAATCG
AGGGATTCCAGGTGCAAGAGCTGCAGACTTACAGAGCTACATGGACATGCTGAACCCAGAGAAGAGCTTG
CCTCGGGGCAAGCTAGGGAAGCCTTCCCCGCCACCACCTCCACCACCACCACCACCAAGCTTCCCGCCAC
CCCCACCACCCACAGGCACCCAGCCGCCCCCACCTCCACCAGGCTACCCAGCTCCCAATCCCCCTGTGGG
ACTGCATCTGAATAACATTTACATGCAGACCAAGAACAAGCTTCGCCATGTGGAGGTGGACTCGCTCAAG
GAGCCCAAGGTGGAGCTGAACGATCAGTTTGCACAGCCGAGCTCGGGCGACGGCCACTCGGGGCTACACA
GGCAGGACTCCGGGCTGCTCAGGCAGGATTCGGAGCTGCTGCACAGGCAGGAGCTGCTCAGGCACAGCAC
CGGACTGCGCAGGCAGGACTCCGACCGCAAACAGCGCTCGTTCAGTAAACAGCCCAGCACGGGGGACTAC
TACCGCCAGCTGGGCCGCAGCCCGGGGGAGCCGCTGGCCGCACGCCCGGGCATGGCCCACAGCGAGGAGG
CGGCGCTGCTCCCCGGGAACCACGTGCACAACGGCTGCTCAGCGGACTCCAAAGCGTCCAGGGAGCTGCC
GCCGCCACCGCCGCCGCCGCCGCTGCCCGAGGCCCTGAGTTCGCCGCCGCCCGCCCCACCTCTGCCCATC
GAGGGCGCGGGCGCAGCCTGCGGGCAGCGTCGTTCCTCGTCTTCTACTGGCAAAGTGAGAGTCCTGAGAC
ACAGGAAGAGCACCAAATCTTTCAACATGATGTCCCCAACGGGTGATAACTCAGAGCTTCTGGCTGAGAT
AAAGGCGGGCAAGAGCCTGAAGCCGACACCGCAGAGCAAGGGGCTGACAACCGTGTTCTCAGGCAGTGGG
CAGCCAGCCTCCCAGCCTGAGTCACCGCAGCCTCTGGTGTCACCTGCGCCATCTCGGACTCGGAGCCCCA
CCCCGCCAGCCTCTGGGTCTCAGCCACTGCTCAATGGCAGTGTGGTGCCGGCACCACCTGCCACCCCGGC
ACCTGGAGTCCATCTGGATGTGGAGGCCCTCATTCCCACTCTTGATGAGCAGGGCCGGCCCATCCCGGAG
TGGAAGCGCCAGGTGATGGTCCGCAAGCTGCAGCAGAAGATGCAGGAGGAAGAGGAGCAGCGGAGGAAGG
AGGAAGAGGAGGAGGCCCGGCTCGCCAGCCTGCCTGCCTGGAGACGAGACATTCTTCGGAAGAAGCTGGA
GGAGGAGAGGGAGCAGAAGCGAAAAGAGGAGGAGCGGCAAAAGCTGGAGGAAATACAGAGGGCGAAAGAA
CAGTCGGAGAAGCTGCGGACACTAGGCTACGACGAAGCCAAGCTCGCGCCCTGGCAGCGACAGGTCATCT
TGAAGAAGGGGGAGATCCCTAAGTAA

Translation (871 aa):
MALEQALQAARRGDLDVLRSLHAAGLLGPSLRDSLDALPVHHAARSGKLHCLRYLVEEVALPAVSRARNG
ATPAHDAAATGYLSCLQWLLTQGGCRVQEKDNSGATVLHLAARFGHPDVVKWLLYQGGANSAITTDTGAL
PIHYAAAKGDLPSLKLLVGHYPEGVNAQTNNGATPLYLACQEGHLEVTKYLVQECSADPHLRAQDGMTPL
HAAAQMGHNPVLVWLVSFADVSFSEQDHDGATAMHFAASRGHTKVLSWLLLHGAEISQDLWGGTPLHDAA
ENGELECCQILAVNGAGLDVRDHDGYTAADLAEFNGHTHCSRYLRTVQTLSLEHRVLSRDQSMDLEAKQL
DSGMSSPNTTMSVQPMTFDLGSPTSTFSNYDSCSSSHSSSKGQRSNRGIPGARAADLQSYMDMLNPEKSL
PRGKLGKPSPPPPPPPPPPSFPPPPPPTGTQPPPPPPGYPAPNPPVGLHLNNIYMQTKNKLRHVEVDSLK
EPKVELNDQFAQPSSGDGHSGLHRQDSGLLRQDSELLHRQELLRHSTGLRRQDSDRKQRSFSKQPSTGDY
YRQLGRSPGEPLAARPGMAHSEEAALLPGNHVHNGCSADSKASRELPPPPPPPPLPEALSSPPPAPPLPI
EGAGAACGQRRSSSSTGKVRVLRHRKSTKSFNMMSPTGDNSELLAEIKAGKSLKPTPQSKGLTTVFSGSG
QPASQPESPQPLVSPAPSRTRSPTPPASGSQPLLNGSVVPAPPATPAPGVHLDVEALIPTLDEQGRPIPE
WKRQVMVRKLQQKMQEEEEQRRKEEEEEARLASLPAWRRDILRKKLEEEREQKRKEEERQKLEEIQRAKE
QSEKLRTLGYDEAKLAPWQRQVILKKGEIPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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