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Report for CCDS18912.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18912.1 Public Mus musculus 4 Dhrs3 23 108 98 CCDS HistoryNCBI Gene:20148Re-query CCDS DB by CCDS ID:18912.1Re-query CCDS DB by GeneID:20148See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18912.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000154208.7 ENSMUSP00000122552.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000154208.7Link to Ensembl Protein Viewer:ENSMUSP00000122552.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000154208Re-query CCDS DB by Protein ID:ENSMUSP00000122552
Original member NCBI NM_011303.7 NP_035433.1 Updated not alive Link to Nucleotide Sequence:NM_011303.7Link to Protein Sequence:NP_035433.1Re-query CCDS DB by Nucleotide ID:NM_011303Re-query CCDS DB by Protein ID:NP_035433
Current member NCBI NM_011303.8 NP_035433.1 Accepted alive Link to Nucleotide Sequence:NM_011303.8Link to Protein Sequence:NP_035433.1Re-query CCDS DB by Nucleotide ID:NM_011303Re-query CCDS DB by Protein ID:NP_035433Link to BLAST:NP_035433.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035433.1 302 O88876-1 302 100% 0 0

Chromosomal Locations for CCDS 18912.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 144893515 144893709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144918651 144918794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144919385 144919504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144919841 144920079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144923906 144924031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144927135 144927219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (909 nt):
ATGGTGTGGAAATGGCTGGGCGCGCTGGTAGTGTTCCCTCTGCAAATGATCTATTTGGTAACCAAAGCAG
CCGTGGGAATGGTGTTGCCCCCCAAGCTTCGGGACTTGTCGCGGGAGTCAGTCCTCATCACCGGCGGTGG
GAGAGGCATCGGACGCCACCTCGCTCGGGAGTTCGCAGAGCGTGGCGCCAGAAAGATTGTTCTCTGGGGG
CGGACTGAAAAATGCCTCAAGGAGACGACAGAGGAGATTCGGCAGATGGGCACAGAGTGCCACTACTTCA
TCTGTGACGTGGGCAACCGGGAAGAGGTGTACCAGATGGCCAAAGCTGTCCGAGAGAAGGTGGGTGACAT
CACCATCCTGGTGAACAATGCCGCTGTGGTCCATGGAAAAAGCTTGATGGACAGTGACGATGATGCCCTC
CTCAAGTCCCAGCATGTCAACACCCTGGGCCAATTCTGGACCACCAAGGCCTTTTTGCCACGTATGCTGG
AACTCCAGAACGGCCATATTGTGTGCCTCAATTCCGTGCTTGCACTGTCAGCCATCCCTGGCGCCATCGA
CTACTGCACGTCAAAAGCATCAGCCTTCGCCTTCATGGAGAGCCTGACCTTGGGGCTGTTGGACTGTCCT
GGTGTCAGCGCCACCACCGTTCTGCCCTTTCACACCAGCACCGAGATGTTCCAGGGCATGAGAGTCAGGT
TTCCCAACCTCTTCCCGCCACTGAAGCCAGAGACAGTAGCCCGGAGGACGGTAGATGCTGTGCAACAAAA
CCAGGCCCTTCTCTTGCTCCCGTGGACCATGAATATCCTCATTATCTTGAAAAGCATACTCCCACAAGCT
GCACTGGAGGAGATTCACAGGTTCTCGGGGACTTACACCTGTATGAACACCTTTAAGGGGAGGACATAG

Translation (302 aa):
MVWKWLGALVVFPLQMIYLVTKAAVGMVLPPKLRDLSRESVLITGGGRGIGRHLAREFAERGARKIVLWG
RTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQMAKAVREKVGDITILVNNAAVVHGKSLMDSDDDAL
LKSQHVNTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLTLGLLDCP
GVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETVARRTVDAVQQNQALLLLPWTMNILIILKSILPQA
ALEEIHRFSGTYTCMNTFKGRT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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