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Report for CCDS18432.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18432.1 Public Mus musculus 4 Tmem59 23 108 98 CCDS HistoryNCBI Gene:56374Re-query CCDS DB by CCDS ID:18432.1Re-query CCDS DB by GeneID:56374See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18432.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030361.10 ENSMUSP00000030361.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030361.10Link to Ensembl Protein Viewer:ENSMUSP00000030361.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000030361Re-query CCDS DB by Protein ID:ENSMUSP00000030361
Original member Current member NCBI NM_029565.3 NP_083841.4 Accepted alive Link to Nucleotide Sequence:NM_029565.3Link to Protein Sequence:NP_083841.4Re-query CCDS DB by Nucleotide ID:NM_029565Re-query CCDS DB by Protein ID:NP_083841Link to BLAST:NP_083841.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083841.4 323 Q9QY73 323 100% 0 0

Chromosomal Locations for CCDS 18432.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 107178729 107178917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 107185778 107185883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 107187619 107187713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 107190535 107190687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 107192462 107192543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 107193299 107193380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 107197506 107197614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 107200368 107200523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (972 nt):
ATGGCGGCGCCAAAGGGGAAGCTTTGGGTCCAGGCCCAACTGGGGCTCCCGCCGCTGCTGCTGTTGACTA
TGGCGCTGGCCGGAGGCTCGGGGACTGCAGCGGCCGAAGCCTTTGACTCGGTCCTGGGAGACACAGCGTC
CTGTCACCGGGCCTGTCAGCTGACCTACCCCTTGCACACCTACCCGAAGGAAGAGGAGTTATACGCATGC
CAGAGAGGCTGCAGGCTGTTTTCAATTTGCCAGTTTGTGGATGATGGGCTTGATTTAAATCGGACCAAGC
TGGAATGTGAATCTGCGTGCACAGAAGCATATTCCCAACCTGATGAGCAGTATGCTTGTCATCTTGGCTG
CCAGGATCAGTTGCCATTTGCTGAACTGAGACAAGAACAACTCATGTCCCTGATGCCAAGAATGCATCTC
CTCTTCCCTCTGACTCTGGTGAGGTCGTTCTGGAGTGACATGATGGACTCTGCACAGAGCTTCATAACCT
CTTCATGGACTTTTTATCTTCAAGCCGATGACGGAAAAATAGTTATATTCCAGTCTAAGCCAGAAATTCA
GTATGCACCGCAGTTGGAGCAGGAGCCTACAAACTTGAGAGAATCATCTTTAAGCAAAATGTCCTATCTG
CAGATGAGAAACTCACAAGCACACAGGAACTACCTTGAAGAGGAAGAAAGCGATGGCTTTTTAAGATGTC
TATCTCTTAACTCTGGATGGATTTTAACCACAACCCTTGTCCTCTCGGTGATGGTGTTGCTCTGGATCTG
TTGTGCAGCTGTTGCTACAGCTGTAGAACAGTATGTTCCCCCTGAGAAGCTGAGTATCTATGGTGACTTG
GAATTTATGAATGAACAAAAGCTGAGCAGATACCCAGCTCCTTCTCTTGTGATTGTTAGGTCTCAGACTG
AAGAACATGAGGAGGCAGGGCCCCTGCCCACCAAGGTGAACCTTGCTCACTCAGAAATCTAA

Translation (323 aa):
MAAPKGKLWVQAQLGLPPLLLLTMALAGGSGTAAAEAFDSVLGDTASCHRACQLTYPLHTYPKEEELYAC
QRGCRLFSICQFVDDGLDLNRTKLECESACTEAYSQPDEQYACHLGCQDQLPFAELRQEQLMSLMPRMHL
LFPLTLVRSFWSDMMDSAQSFITSSWTFYLQADDGKIVIFQSKPEIQYAPQLEQEPTNLRESSLSKMSYL
QMRNSQAHRNYLEEEESDGFLRCLSLNSGWILTTTLVLSVMVLLWICCAAVATAVEQYVPPEKLSIYGDL
EFMNEQKLSRYPAPSLVIVRSQTEEHEEAGPLPTKVNLAHSEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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