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Report for CCDS1826.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1826.1 Public Homo sapiens 2 ATP6V1E2 24 110 108 CCDS HistoryNCBI Gene:90423Re-query CCDS DB by CCDS ID:1826.1Re-query CCDS DB by GeneID:90423See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1826.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000306448.4 ENSP00000304891.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000306448.4Link to Ensembl Protein Viewer:ENSP00000304891.4Re-query CCDS DB by Nucleotide ID:ENST00000306448Re-query CCDS DB by Protein ID:ENSP00000304891
Original member Current member EBI ENST00000522587.6 ENSP00000428141.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000522587.6Link to Ensembl Protein Viewer:ENSP00000428141.1Re-query CCDS DB by Nucleotide ID:ENST00000522587Re-query CCDS DB by Protein ID:ENSP00000428141
Original member Current member NCBI NM_001318063.2 NP_001304992.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001318063.2Link to Protein Sequence:NP_001304992.1Re-query CCDS DB by Nucleotide ID:NM_001318063Re-query CCDS DB by Protein ID:NP_001304992Link to BLAST:NP_001304992.1
Original member Current member NCBI NM_001371281.1 NP_001358210.1 Accepted alive Link to Nucleotide Sequence:NM_001371281.1Link to Protein Sequence:NP_001358210.1Re-query CCDS DB by Nucleotide ID:NM_001371281Re-query CCDS DB by Protein ID:NP_001358210Link to BLAST:NP_001358210.1
Original member Current member NCBI NM_001371282.1 NP_001358211.1 Accepted alive Link to Nucleotide Sequence:NM_001371282.1Link to Protein Sequence:NP_001358211.1Re-query CCDS DB by Nucleotide ID:NM_001371282Re-query CCDS DB by Protein ID:NP_001358211Link to BLAST:NP_001358211.1
Original member Current member NCBI NM_001371283.1 NP_001358212.1 Accepted alive Link to Nucleotide Sequence:NM_001371283.1Link to Protein Sequence:NP_001358212.1Re-query CCDS DB by Nucleotide ID:NM_001371283Re-query CCDS DB by Protein ID:NP_001358212Link to BLAST:NP_001358212.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001304992.1 226 Q96A05 226 100% 0 0
NP_001358210.1 226 Q96A05 226 100% 0 0
NP_001358211.1 226 Q96A05 226 100% 0 0
NP_001358212.1 226 Q96A05 226 100% 0 0

Chromosomal Locations for CCDS 1826.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 46512031 46512711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (681 nt):
ATGGCCCTGAGTGATGTCGATGTGAAAAAGCAGATTAAGCACATGATGGCTTTCATTGAGCAGGAAGCCA
ATGAGAAAGCAGAGGAAATCGATGCCAAGGCTGAGGAAGAGTTTAACATTGAGAAAGGACGCCTCGTGCA
AACCCAACGACTGAAGATTATGGAGTATTATGAGAAAAAGGAGAAGCAGATAGAGCAGCAGAAGAAAATC
CTGATGTCCACCATGAGGAATCAGGCGAGGCTGAAAGTCCTGAGAGCCCGAAATGACCTCATCTCAGATT
TGCTCAGTGAGGCGAAGCTGAGACTCAGCAGGATTGTGGAGGACCCAGAGGTCTACCAGGGGCTGCTGGA
TAAACTGGTGCTCCAGGGTCTGCTCCGACTGCTGGAACCTGTGATGATTGTACGCTGCCGGCCACAAGAC
CTCCTCCTGGTGGAGGCTGCTGTACAAAAAGCCATCCCCGAGTACATGACAATTTCCCAGAAACATGTGG
AGGTCCAGATTGATAAAGAGGCATACCTGGCTGTGAATGCAGCTGGAGGTGTGGAGGTCTACAGTGGCAA
TCAGAGAATAAAGGTTTCAAATACCTTGGAAAGCCGACTGGATCTCTCAGCCAAGCAAAAGATGCCAGAA
ATACGAATGGCCTTGTTTGGTGCTAACACCAACAGAAAGTTCTTTATATAA

Translation (226 aa):
MALSDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQIEQQKKI
LMSTMRNQARLKVLRARNDLISDLLSEAKLRLSRIVEDPEVYQGLLDKLVLQGLLRLLEPVMIVRCRPQD
LLLVEAAVQKAIPEYMTISQKHVEVQIDKEAYLAVNAAGGVEVYSGNQRIKVSNTLESRLDLSAKQKMPE
IRMALFGANTNRKFFI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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