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Report for CCDS1810.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1810.2 Public Homo sapiens 2 OXER1 24 110 108 CCDS HistoryNCBI Gene:165140Re-query CCDS DB by CCDS ID:1810.2Re-query CCDS DB by GeneID:165140See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 1810.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378661.4 ENSP00000367930.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000378661.4Link to Ensembl Protein Viewer:ENSP00000367930.3Re-query CCDS DB by Nucleotide ID:ENST00000378661Re-query CCDS DB by Protein ID:ENSP00000367930
Original member Current member NCBI NM_148962.5 NP_683765.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_148962.5Link to Protein Sequence:NP_683765.2Re-query CCDS DB by Nucleotide ID:NM_148962Re-query CCDS DB by Protein ID:NP_683765Link to BLAST:NP_683765.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_683765.2 384 Q8TDS5 384 100% 0 0

Chromosomal Locations for CCDS 1810.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 42762908 42764062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1155 nt):
ATGGAACTTCATAACCTGAGCTCTCCATCTCCCTCTCTCTCCTCCTCTGTTCTCCCTCCCTCCTTCTCTC
CCTCACCCTCCTCTGCTCCCTCTGCCTTTACCACTGTGGGGGGGTCCTCTGGAGGGCCCTGCCACCCCAC
CTCTTCCTCGCTGGTGTCTGCCTTCCTGGCACCAATCCTGGCCCTGGAGTTTGTCCTGGGCCTGGTGGGG
AACAGTTTGGCCCTCTTCATCTTCTGCATCCACACGCGGCCCTGGACCTCCAACACGGTGTTCCTGGTCA
GCCTGGTGGCCGCTGACTTCCTCCTGATCAGCAACCTGCCCCTCCGCGTGGACTACTACCTCCTCCATGA
GACCTGGCGCTTTGGGGCTGCTGCCTGCAAAGTCAACCTCTTCATGCTGTCCACCAACCGCACGGCCAGC
GTTGTCTTCCTCACAGCCATCGCACTCAACCGCTACCTGAAGGTGGTGCAGCCCCACCACGTGCTGAGCC
GTGCTTCCGTGGGGGCAGCTGCCCGGGTGGCCGGGGGACTCTGGGTGGGCATCCTGCTCCTCAACGGGCA
CCTGCTCCTGAGCACCTTCTCCGGCCCCTCCTGCCTCAGCTACAGGGTGGGCACGAAGCCCTCGGCCTCG
CTCCGCTGGCACCAGGCACTGTACCTGCTGGAGTTCTTCCTGCCACTGGCGCTCATCCTCTTTGCTATTG
TGAGCATTGGGCTCACCATCCGGAACCGTGGTCTGGGCGGGCAGGCAGGCCCGCAGAGGGCCATGCGTGT
GCTGGCCATGGTGGTGGCCGTCTACACCATCTGCTTCTTGCCCAGCATCATCTTTGGCATGGCTTCCATG
GTGGCTTTCTGGCTGTCCGCCTGCCGATCCCTGGACCTCTGCACACAGCTCTTCCATGGCTCCCTGGCCT
TCACCTACCTCAACAGTGTCCTGGACCCCGTGCTCTACTGCTTCTCTAGCCCCAACTTCCTCCACCAGAG
CCGGGCCTTGCTGGGCCTCACGCGGGGCCGGCAGGGCCCAGTGAGCGACGAGAGCTCCTACCAACCCTCC
AGGCAGTGGCGCTACCGGGAGGCCTCTAGGAAGGCGGAGGCCATAGGGAAGCTGAAAGTGCAGGGCGAGG
TCTCTCTGGAAAAGGAAGGCTCCTCCCAGGGCTGA

Translation (384 aa):
MELHNLSSPSPSLSSSVLPPSFSPSPSSAPSAFTTVGGSSGGPCHPTSSSLVSAFLAPILALEFVLGLVG
NSLALFIFCIHTRPWTSNTVFLVSLVAADFLLISNLPLRVDYYLLHETWRFGAAACKVNLFMLSTNRTAS
VVFLTAIALNRYLKVVQPHHVLSRASVGAAARVAGGLWVGILLLNGHLLLSTFSGPSCLSYRVGTKPSAS
LRWHQALYLLEFFLPLALILFAIVSIGLTIRNRGLGGQAGPQRAMRVLAMVVAVYTICFLPSIIFGMASM
VAFWLSACRSLDLCTQLFHGSLAFTYLNSVLDPVLYCFSSPNFLHQSRALLGLTRGRQGPVSDESSYQPS
RQWRYREASRKAEAIGKLKVQGEVSLEKEGSSQG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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