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Report for CCDS17311.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17311.1 Public Mus musculus 3 Qrfpr 23 108 98 CCDS HistoryNCBI Gene:229214Re-query CCDS DB by CCDS ID:17311.1Re-query CCDS DB by GeneID:229214See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17311.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000091227.8 ENSMUSP00000088768.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000091227.8Link to Ensembl Protein Viewer:ENSMUSP00000088768.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000091227Re-query CCDS DB by Protein ID:ENSMUSP00000088768
Original member NCBI NM_198192.2 NP_937835.1 Updated not alive Link to Nucleotide Sequence:NM_198192.2Link to Protein Sequence:NP_937835.1Re-query CCDS DB by Nucleotide ID:NM_198192Re-query CCDS DB by Protein ID:NP_937835
Current member NCBI NM_198192.3 NP_937835.1 Accepted alive Link to Nucleotide Sequence:NM_198192.3Link to Protein Sequence:NP_937835.1Re-query CCDS DB by Nucleotide ID:NM_198192Re-query CCDS DB by Protein ID:NP_937835Link to BLAST:NP_937835.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_937835.1 433 P83861 433 100% 0 0

Chromosomal Locations for CCDS 17311.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 36179889 36180295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 36180945 36181042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 36182454 36182689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 36188156 36188217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 36189452 36189610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 36221900 36222239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1302 nt):
ATGCAGGCGCTCAACATCACCGCGGAGCAGTTTTCCCGGCTGCTGAGCGCGCACAACCTGACTCGGGAAC
AGTTCATTCATCGCTATGGGCTGCGACCGCTGGTCTACACTCCGGAGCTGCCCGCGCGCGCTAAACTGGC
CTTTGCGCTGGCTGGAGCACTCATTTTTGCCCTGGCGCTCTTTGGCAACTCTCTGGTCATCTATGTGGTG
ACCCGCAGCAAGGCCATGCGCACCGTCACCAACATCTTCATCTGCTCTCTGGCACTCAGTGATCTGCTCA
TTGCCTTCTTCTGCATCCCCGTCACGATGCTCCAGAACATCTCCGACAAGTGGCTGGGTGGTGCCTTCAT
CTGCAAGATGGTGCCCTTCGTCCAGTCCACTGCTGTTGTGACGGAAATCCTCACCATGACTTGCATCGCT
GTTGAGAGGCACCAAGGACTCATCCATCCTTTTAAAATGAAGTGGCAGTACACTACCCGAAGGGCTTTCA
CAATCTTGGGTGTGGTCTGGTTGGCAGCCATCATCGTAGGATCACCCATGTGGCACGTACAACGCCTCGA
GATTAAGTATGACTTCCTCTATGAGAAAGAACATGTCTGCTGTTTGGAAGAGTGGGCCAGCCCCATGCAC
CAGAGAATCTACACCACCTTCATCCTCGTCATCCTCTTCCTCCTGCCGCTTGTGGTGATGCTTGTCCTCT
ACAGCAAGATTGGCTATGAACTGTGGATCAAGAAGAGAGTTGGAGACAGTTCAGCACTTCAGACTATCCA
CGGGAAAGAAATGTCCAAAATAGCCAGGAAGAAGAAGCGGGCTGTCGTTATGATGGTGACAGTGGTGGCT
CTCTTCGCTGCGTGCTGGGCACCTTTCCATGTTGTTCACATGATGGTTGAGTACAGTAACTTTGAAAAAG
AGTATGATGATGTCACAATCAAGATGGTTTTTGCTGTTGCACAAACAATTGGCTTTTTCAACTCCATCTG
TAATCCCTTTGTGTATGCATTTATGAATGAAAACTTCAAAAAGAATTTTTTGTCTGCGGTTTGTTATTGC
ATAGTAAGAGAAACCTTCTCCCCAGGACAGAAGCCTGGAAATTCTGGGATTTCAATGATGCAAAAGAGAG
CAAAGTTATCACGATCACAGCGTCCAGTGGCGGAAGCCAAAGGAGACTTATTCAGCGATGCCAACGTTGA
TGTCAAATTGTGTGAGCAGCCAGGGGAGAAAAGGCAACTCAAGCGACAGCTTGCCTTCTTTAGTTCTGAA
CTTTCTGAAAACTCTACTTTCGGCAGTGGACATGAACTGTAA

Translation (433 aa):
MQALNITAEQFSRLLSAHNLTREQFIHRYGLRPLVYTPELPARAKLAFALAGALIFALALFGNSLVIYVV
TRSKAMRTVTNIFICSLALSDLLIAFFCIPVTMLQNISDKWLGGAFICKMVPFVQSTAVVTEILTMTCIA
VERHQGLIHPFKMKWQYTTRRAFTILGVVWLAAIIVGSPMWHVQRLEIKYDFLYEKEHVCCLEEWASPMH
QRIYTTFILVILFLLPLVVMLVLYSKIGYELWIKKRVGDSSALQTIHGKEMSKIARKKKRAVVMMVTVVA
LFAACWAPFHVVHMMVEYSNFEKEYDDVTIKMVFAVAQTIGFFNSICNPFVYAFMNENFKKNFLSAVCYC
IVRETFSPGQKPGNSGISMMQKRAKLSRSQRPVAEAKGDLFSDANVDVKLCEQPGEKRQLKRQLAFFSSE
LSENSTFGSGHEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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