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Report for CCDS16911.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16911.1 Public Mus musculus 2 Kif3b 23 108 98 CCDS HistoryNCBI Gene:16569Re-query CCDS DB by CCDS ID:16911.1Re-query CCDS DB by GeneID:16569See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16911.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028977.6 ENSMUSP00000028977.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028977.6Link to Ensembl Protein Viewer:ENSMUSP00000028977.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000028977Re-query CCDS DB by Protein ID:ENSMUSP00000028977
Original member Current member NCBI NM_008444.4 NP_032470.3 Accepted alive Link to Nucleotide Sequence:NM_008444.4Link to Protein Sequence:NP_032470.3Re-query CCDS DB by Nucleotide ID:NM_008444Re-query CCDS DB by Protein ID:NP_032470Link to BLAST:NP_032470.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032470.3 747 Q61771 747 100% 0 0

Chromosomal Locations for CCDS 16911.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 153316281 153317684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 153320275 153320376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 153320579 153320701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 153320784 153320902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 153322812 153322925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 153323537 153323642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 153329572 153329750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 153330059 153330155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2244 nt):
ATGTCCAAGTTAAAAAGCTCAGAATCAGTCCGGGTGGTGGTCCGCTGTCGGCCCATGAATGGCAAAGAAA
AGGCTGCATCTTATGACAAGGTGGTAGATGTGGATGTGAAGCTGGGGCAGGTGTCTGTGAAGAACCCCAA
AGGCACATCCCATGAGATGCCCAAGACCTTCACCTTCGACGCTGTGTATGATTGGAACGCCAAGCAGTTT
GAGCTCTATGATGAGACGTTCCGACCACTCGTGGACTCTGTGCTGCAGGGTTTCAATGGCACAATTTTTG
CCTATGGACAAACAGGAACTGGGAAAACCTATACCATGGAGGGAGTTCGTGGTGACCCTGAAAAAAGAGG
GGTCATCCCCAACTCCTTTGATCACATCTTCACCCACATCTCTCGATCTCAGAATCAGCAGTACCTGGTC
CGGGCGTCTTACTTAGAGATCTATCAAGAAGAGATTCGAGACTTGCTTTCAAAGGATCAGACCAAAAGGC
TAGAGCTCAAAGAGAGACCAGATACAGGAGTGTATGTAAAGGATTTGTCTTCTTTTGTCACGAAGAGTGT
GAAGGAGATAGAGCATGTGATGAATGTGGGAAACCAGAACCGGTCTGTCGGTGCTACAAACATGAATGAG
CACAGCTCACGGTCGCATGCAATCTTTGTTATCACTATTGAATGCAGCGAGGTGGGCCTGGATGGTGAAA
ACCACATCCGGGTAGGAAAGCTGAATCTTGTAGATCTTGCTGGCAGTGAGCGGCAAGCCAAGACTGGAGC
TCAAGGGGAAAGACTGAAGGAAGCCACCAAGATCAACCTGTCCCTTTCCGCCTTGGGTAATGTTATCTCT
GCCCTTGTAGATGGCAAAAGCACCCATATTCCATATAGAGACTCAAAGCTGACCAGGCTTCTCCAAGATT
CCCTTGGTGGCAATGCCAAAACTGTGATGGTAGCCAATGTGGGGCCTGCCTCTTACAATGTAGAAGAGAC
CCTGACCACTCTGAGATATGCCAACCGTGCCAAAAACATTAAGAACAAGCCAAGGGTCAATGAGGACCCA
AAGGATGCTCTGCTTCGAGAATTCCAAGAAGAAATTGCTCGGCTCAAGGCCCAGCTGGAAAAACGTTCCA
TTGGCAGGAGGAAGAGGCGAGAGAAGCGGAGGGAAGGTGGTGGCAGTGGTGGGGGTGGGGAAGAGGAGGA
GGAGGAGGGAGAAGAGGGTGAGGAGGACGGGGATGATAAGGATGATTACTGGCGGGAACAGCAAGAAAAA
CTGGAGATTGAGAAGCGGGCCATTGTAGAGGACCACAGCTTGGTTGCAGAGGAGAAGATGAGGCTGCTGA
AGGAGAAGGAGAAAAAGATGGAGGACCTGCGGCGAGAGAAGGATGCTGCAGAGATGCTGGGTGCCAAAAT
CAAGGCCATGGAGAGTAAGCTGCTTGTCGGAGGAAAAAATATAGTAGATCATACAAACGAACAGCAGAAG
ATCCTGGAGCAAAAACGCCAGGAGATCGCAGAGCAGAAACGTCGAGAAAGAGAAATCCAGCAGCAAATGG
AGAGTCGAGATGAGGAGACCCTGGAACTGAAAGAGACTTACACCTCACTGCAGCAGGAGGTAGACATCAA
GACCAAAAAGCTCAAAAAGCTCTTTTCCAAGCTTCAGGCCGTGAAGGCCGAGATCCACGACCTCCAAGAA
GAACACATCAAAGAGCGCCAGGAGCTGGAGCAGACGCAGAATGAACTCACCCGGGAGCTAAAGCTCAAGC
ATCTTATTATAGAAAACTTTATTCCCTTGGAAGAGAAGAATAAAATTATGAATAGATCCTTTTTTGATGA
TGAAGAAGACCATTGGAAATTACATCCTATAACCAGACTGGAAAACCAGCAGATGATGAAGCGGCCTGTC
TCTGCTGTGGGATACAAGAGACCTCTGAGCCAGCATGCACGGATGTCCATGATGATTCGGCCAGAGCCCC
GGTACAGGGCGGAGAACATCATGCTCTTGGAGTTAGATATGCCCAGCCGGACAACCAGAGACTACGAGGG
CCCAGCCATCTCTCCCAAGGTTCAGGCTGCGCTGGATGCAGCTCTGCAGGATGAAGATGAGATACAGGTG
GATGCCTCATCCTTTGAAAGTACTGCCAGCAGAAAACCCAAGGCCAGGCCCAAGAGTGGCAGGAAATCAG
GATCCTCCTCTTCCTCCTCAGGAAACCCTGCATCTCAGTTTTACCCACAGTCTCGGGGGCTGGTTCCCAA
GTAA

Translation (747 aa):
MSKLKSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTSHEMPKTFTFDAVYDWNAKQF
ELYDETFRPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGVRGDPEKRGVIPNSFDHIFTHISRSQNQQYLV
RASYLEIYQEEIRDLLSKDQTKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNE
HSSRSHAIFVITIECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVIS
ALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDP
KDALLREFQEEIARLKAQLEKRSIGRRKRREKRREGGGSGGGGEEEEEEGEEGEEDGDDKDDYWREQQEK
LEIEKRAIVEDHSLVAEEKMRLLKEKEKKMEDLRREKDAAEMLGAKIKAMESKLLVGGKNIVDHTNEQQK
ILEQKRQEIAEQKRREREIQQQMESRDEETLELKETYTSLQQEVDIKTKKLKKLFSKLQAVKAEIHDLQE
EHIKERQELEQTQNELTRELKLKHLIIENFIPLEEKNKIMNRSFFDDEEDHWKLHPITRLENQQMMKRPV
SAVGYKRPLSQHARMSMMIRPEPRYRAENIMLLELDMPSRTTRDYEGPAISPKVQAALDAALQDEDEIQV
DASSFESTASRKPKARPKSGRKSGSSSSSSGNPASQFYPQSRGLVPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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