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Report for CCDS16819.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16819.1 Public Mus musculus 2 Kat14 23 108 98 CCDS HistoryNCBI Gene:228714Re-query CCDS DB by CCDS ID:16819.1Re-query CCDS DB by GeneID:228714See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16819.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028911.14 ENSMUSP00000028911.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028911.14Link to Ensembl Protein Viewer:ENSMUSP00000028911.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000028911Re-query CCDS DB by Protein ID:ENSMUSP00000028911
Original member Current member NCBI NM_181417.3 NP_852082.2 Accepted alive Link to Nucleotide Sequence:NM_181417.3Link to Protein Sequence:NP_852082.2Re-query CCDS DB by Nucleotide ID:NM_181417Re-query CCDS DB by Protein ID:NP_852082Link to BLAST:NP_852082.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_852082.2 779 Q8CID0 779 100% 0 0

Chromosomal Locations for CCDS 16819.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 144373597 144373855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 144375845 144375963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 144380707 144380828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 144389175 144389356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 144393304 144393720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 144393816 144394378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 144400686 144400822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 144402395 144402570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 144403999 144404189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 144406623 144406796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2340 nt):
ATGGATAGTAGCATCCACCTGAGTGGGCTCCTCAGTCGGCATGACGATGACGCCACGAGAACGTCCACCT
CGGAAGGGCTGGAGGAAGGCGAGGTGGAGGGAGAGACTCTCCTAATTGTGGAATCGGAGGATCAGGCGTC
AGTGGACTTATCTCACGACCAGAGTGGGGATTCCCTCAACAGCGATGAAGGAGATGTGTCCTGGATGGAG
GAACAGCTGTCTTACTTCTGTGACAAGTGCCAAAAGTGGATCCCAGCCAGTCAGCTGAGGGAGCAGCTCA
GTTACCTGAAGGGCGATAACTTTTTCAGGTTTACTTGTTGCGATTGCTCTGCAGACGGCAAGGAGCAGTA
CGAGAGGCTGAAACTGACATGGCAGCAAGTGGTCATGCTGGCAATGTACAACCTGTCTCTGGAAGGAAGT
GGACGTCAAGGTTATTTCCGGTGGAAAGAAGATATCTGTGCTTTTATTGAGAAACATTGGACTTTTTTAC
TAGGAAATAGGAAAAAGACGTCGACGTGGTGGAGCACAGTAGCAGGCTGCCTCAGCGTGGGAAGCCCTGT
TTATTTCCGGTCAGGTGCTCAGGAGTTTGGAGAGCCCGGATGGTGGAAACTTGTTCATAACAGACCCCCA
ACCATGAGGCCGGAGGGAGAGAAGCTGGCTGCCTCCACCTTGAAAGTGAAAGCTTCAAAGCCAACGCTGG
ATCCCATCATTACTGTTGAGGGACTCAGAAAACGGGCAAGCCGGAATCCTGTGGAATCTGCCATGGAATT
GAAAGAGAAGCGGTCGCGAACACAGGAAGCTAAAGACATCAGAAGAGCTCAGAAAGAAGCGGCTGGCCTC
CTCGACAGGAGCACCTCTTCCACCCCCGTCAAGTTCATAAGCCGAGGCCGGAGGCCGGATCTGATTTTGG
AGAAAGGAGAAGTGATCGACTTCTCGTCCCTGAGCTCCTCAGACCGCACTCCCCTCACAAGCCCGTCTCC
TTCTCCGTCTCTGGATTTCTCCGCCCCGGGGACGCCAGCCTCGCACTCGGCCACACCTAGCTTGCTTTCC
GAAGCAGACCTCATCCCAGACGTGATGCCACCCCAAGCCCTGTTTCATGATGACGATGAGCTGGAAGGAG
ATGGAGTTATAGACCCAGGGATGGAGTACATCCCACCCCCAGCTGGGTCAGCGTCTGGGCTGCTTGGGAG
CAGAAAGAAGGTCCGAGCTCCGGAACAGATAAAACAGGAAGTGGACAGCGAGGAGGAGAAGCCAGACAGG
ATGGATGGAGATAGCGAAGACACAGATTCAAACATTTCTCTGCACACTAGAGCTCGAGAAAAGAGGAAGC
CGCCACTGGAAAAGGACATGAAGCCCAAGGGCCCCAGGTATACACCCGTGAGCATCTATGAGGAGAAGCT
GCTGCTCAAGAGGCTGGAGGCGTGCCCCGGCGCCGTGGCCATGACTCCAGAAGCCAGGAGGCTGAAACGG
AAACTGATCGTCCGGCAAGCGAAAAGAGATCGGGGTTTACCACTATTTGACTTGGACGAGGTTGTGAATG
CCGCACTTCTGTTAGTCGATGGGATTTATGGAGCCAAAGATGGAGGAGCTTCCCGGCTTGCAGCTGGACA
AGCTACATACCGGACCACCTGCCAGGACTTTCGGATCCTGGACCGGTACCAGACTGCCTTACCAGCCAGG
AAAGGATTCCGGCACCAGACCACGAGATTTTTGTATCGTTTGGTGGGATCAGAAGATCTGGCTGTGGACC
AAAGTATTATCAGCCCTTATACTTCTCGGATCTTGAAACCTTATATCAGGCGTGATTATGAGACAAAGCC
ACCCAAACTACAGCTCCTGTCACAGATCCGTTCCCACCTGCACAGGAGTGACCCTCACTGGACACCTGGA
CCTGATGCACCCCTCGATTACTGCTATGTCCGACCAAATCACATCCCAACCATCAACTCCATGTGCCAGG
AGTTTTTCTGGCCTGGCATTGACCTGTCTGAGTGTCTGCAGTATCCAGACTTCAGTGTTGTAGTCCTTTA
TAAAAAAGTCATTGTTGCCTTTGGCTTCATGGTTCCTGATGTGAAGTACAACGAAGCTTACATCTCATTT
CTGCTTGTTCATCCTGAGTGGAGGAGAGCAGGGATCGCCACATTCATGATCTATCATCTGATTCAGACAT
GCATGGGCAAGGATGTGACTCTTCATGTCTCGGCAAGCAACCCCGCCATGCTGCTGTACCAGAAGTTTGG
CTTCAAGACCGAGGAGTATGTTTTGGATTTTTATGATAAGTATTACCCGCTGGAGAGTACGGAGTGTAAG
CATGCATTCTTCCTGAGGCTCCGACGCTGA

Translation (779 aa):
MDSSIHLSGLLSRHDDDATRTSTSEGLEEGEVEGETLLIVESEDQASVDLSHDQSGDSLNSDEGDVSWME
EQLSYFCDKCQKWIPASQLREQLSYLKGDNFFRFTCCDCSADGKEQYERLKLTWQQVVMLAMYNLSLEGS
GRQGYFRWKEDICAFIEKHWTFLLGNRKKTSTWWSTVAGCLSVGSPVYFRSGAQEFGEPGWWKLVHNRPP
TMRPEGEKLAASTLKVKASKPTLDPIITVEGLRKRASRNPVESAMELKEKRSRTQEAKDIRRAQKEAAGL
LDRSTSSTPVKFISRGRRPDLILEKGEVIDFSSLSSSDRTPLTSPSPSPSLDFSAPGTPASHSATPSLLS
EADLIPDVMPPQALFHDDDELEGDGVIDPGMEYIPPPAGSASGLLGSRKKVRAPEQIKQEVDSEEEKPDR
MDGDSEDTDSNISLHTRAREKRKPPLEKDMKPKGPRYTPVSIYEEKLLLKRLEACPGAVAMTPEARRLKR
KLIVRQAKRDRGLPLFDLDEVVNAALLLVDGIYGAKDGGASRLAAGQATYRTTCQDFRILDRYQTALPAR
KGFRHQTTRFLYRLVGSEDLAVDQSIISPYTSRILKPYIRRDYETKPPKLQLLSQIRSHLHRSDPHWTPG
PDAPLDYCYVRPNHIPTINSMCQEFFWPGIDLSECLQYPDFSVVVLYKKVIVAFGFMVPDVKYNEAYISF
LLVHPEWRRAGIATFMIYHLIQTCMGKDVTLHVSASNPAMLLYQKFGFKTEEYVLDFYDKYYPLESTECK
HAFFLRLRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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