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Report for CCDS1659.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1659.1 Public Homo sapiens 2 ID2 24 110 108 CCDS HistoryNCBI Gene:3398Re-query CCDS DB by CCDS ID:1659.1Re-query CCDS DB by GeneID:3398See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1659.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000234091.8 ENSP00000234091.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000234091.8Link to Ensembl Protein Viewer:ENSP00000234091.4Re-query CCDS DB by Nucleotide ID:ENST00000234091Re-query CCDS DB by Protein ID:ENSP00000234091
Original member Current member EBI ENST00000396290.2 ENSP00000379585.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000396290.2Link to Ensembl Protein Viewer:ENSP00000379585.1Re-query CCDS DB by Nucleotide ID:ENST00000396290Re-query CCDS DB by Protein ID:ENSP00000379585
Original member Current member EBI ENST00000331129.3 ENSP00000385465.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000331129.3Link to Ensembl Protein Viewer:ENSP00000385465.2Re-query CCDS DB by Nucleotide ID:ENST00000331129Re-query CCDS DB by Protein ID:ENSP00000385465
Original member Current member NCBI NM_002166.5 NP_002157.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002166.5Link to Protein Sequence:NP_002157.2Re-query CCDS DB by Nucleotide ID:NM_002166Re-query CCDS DB by Protein ID:NP_002157Link to BLAST:NP_002157.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002157.2 134 Q02363 134 100% 0 0

Chromosomal Locations for CCDS 1659.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 8682166 8682513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 8682843 8682899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (405 nt):
ATGAAAGCCTTCAGTCCCGTGAGGTCCGTTAGGAAAAACAGCCTGTCGGACCACAGCCTGGGCATCTCCC
GG
AGCAAAACCCCTGTGGACGACCCGATGAGCCTGCTATACAACATGAACGACTGCTACTCCAAGCTCAA
G
GAGCTGGTGCCCAGCATCCCCCAGAACAAGAAGGTGAGCAAGATGGAAATCCTGCAGCACGTCATCGAC
TAC
ATCTTGGACCTGCAGATCGCCCTGGACTCGCATCCCACTATTGTCAGCCTGCATCACCAGAGACCCG
GG
CAGAACCAGGCGTCCAGGACGCCGCTGACCACCCTCAACACGGATATCAGCATCCTGTCCTTGCAGGC
T
TCTGAATTCCCTTCTGAGTTAATGTCAAATGACAGCAAAGCACTGTGTGGCTGA


Translation (134 aa):
MKAFSPVRSVRKNSLSDHSLGISRSKTPVDDPMSLLYNMNDCYSKLKELVPSIPQNKKVSKMEILQHVID
Y
ILDLQIALDSHPTIVSLHHQRPGQNQASRTPLTTLNTDISILSLQ
ASEFPSELMSNDSKALCG



Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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