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Report for CCDS16584.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16584.1 Public Mus musculus 2 Disp2 23 108 98 CCDS HistoryNCBI Gene:214240Re-query CCDS DB by CCDS ID:16584.1Re-query CCDS DB by GeneID:214240See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16584.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037547.8 ENSMUSP00000037136.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037547.8Link to Ensembl Protein Viewer:ENSMUSP00000037136.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000037547Re-query CCDS DB by Protein ID:ENSMUSP00000037136
Original member Current member NCBI NM_170593.3 NP_733481.1 Accepted alive Link to Nucleotide Sequence:NM_170593.3Link to Protein Sequence:NP_733481.1Re-query CCDS DB by Nucleotide ID:NM_170593Re-query CCDS DB by Protein ID:NP_733481Link to BLAST:NP_733481.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_733481.1 1345 Q8CIP5-1 1345 100% 0 0

Chromosomal Locations for CCDS 16584.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 118786062 118786375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 118786700 118786729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 118786871 118786994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 118787272 118787387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 118787559 118787686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 118788017 118788114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 118789599 118792826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4038 nt):
ATGGCTCCTGAGGCAAGCCCAGAGAGAAGCTGCTCCCTCCACACCTGTCCCCTTGAAGACCCAACCGGTG
CTCCGGTACCACCACCAACCGTGTCCACGCTCCAGGCTATAGACCCGACGAGTCCGTTAACGGCTGGTCA
TTTTGCCTTTCCTCGAGCGCCTCAAGACTATCAAGAAGGAAGTTCATTATTAGGATTAGGAGACCAAGCA
TCTCTATGTGCCCATGTCTCCAACCTCAGCACCTCCATAGACACCTCTCAGCATGATGGGGTCTGGAAGC
AACCTTCTGTGCAGCGCCATGTGGTCAGTGTCAGGCAGGAACGCACTTTCCGGATGCCGAAGAGCTATTC
TCATATGATTGCTGATTGGCCAGTGGCTGTGATCGTGGGGTGTCTGGCCTTCATCTTCCTCTGTACCCTA
GCTGGGCTGTTGGGAAGCCCACCACTTGACTTTTCTGAGCCTTTACTGGGTTTTGAGCCTCGAGACACAG
AGATAGGCCGAAGGTTAGAAGTTTGGAAAGCCATGCAGGCCCTCACTGGCCCCAAGAATCTGCTTTCTCT
TTCCCCAGACCCTGAGATGAACAGCTCAAGCCTCCTCAGCACCCTGAGCCCTGCAGCCTGGGGCAGGGCC
GAGGAAAGTGTGGTCCGGACCAAGAGGATGGTGGGGCCTGTGGAAGTCAAAGAAGAAGAGAACTTCTTTT
GTGGCCGCCCTGAGAAGAGCCATGCAAAGCTGGTGTTTGTGTCCACCTCTGGGGGAAGCCTGTGGAACCT
GCAAGCCATCCATTCCATGTGTCGCATAGAACAGGAGCAGATCCGCTCTCACATCAGTTTTGGGGCTCTG
TGCCAGCGATCAGCAGCCAATGAGTGCTGCCCCAGCTGGTCCTTGGGCAACTATCTGGCCGTGCTGTCTA
ACCGCTCCTCCTGCCAAGACACTACCCAAGCCGATACAGACCGCACATTGGCCCTGCTACGGTTCTGTGC
CACCTTCTACCATCGTGGTGTCCTGGTGCCTGCTTGTGTGGGGTCTAGCCAGGACAAACCCCCGTTTTGT
GCCCAAGTTCCTGCCAAGTGTACCGGAAGCAACGTGGTCTATGAATTCCTGCACTACCTGCTAGACAGAG
ACTTTCTGAGTCCCCAGACTGCGGATTACCAGGTGCCCTCCCTCAAGTTTGCCCTGCTCTTCCTGCCCAT
TATAAAGACCTCCTCTCTTCTAGACATCTACCTGGACGGCCTAGGTGACCCAATTAAAGTCTCTGACAAC
TACACATCTATCAGTGGCATGGACTTGGGCCTCAAGCCCAGACTGCTGAAGTATTACCTAGCCGAAGACA
CCATGTATCCCTTGATAGCCCTGGTTGTCATCTTCTTTGGCATGTCCCTCTACCTGCGCTCACTCTTCAT
CACGTTCATGTCACTTCTAGGGGTGCTGGGCTCCCTAATGGTGGCCTACTTTCTTTACCATGTGGCATTC
CGCATGGCCTACTTCCCCTTTGTCAATCTAGCGGCTCTCCTTCTGCTTAGTGGTGTCTGTGTCAATTACA
CGCTCATCTTCTTGGATATGTGGCGCCTCAGCAGGGGTCAGGTGCCTTCCGGGGGCATGCCACACCGTGT
AGGCCGTACCATGCACCACTTTGGCTACCTGCTCCTGGTCTCAGGCCTCACCACCAGCGCAGCCTTCTAC
GGCAGCTACCTGAGCCGCCTGCCCGCAGTGCGTTGCTTTGCTCTTTTCATGGGCACTGCTGTACTAGTGC
ACATGGGGCTCACACTGCTCTGGCTTCCCGCCACCGTGGTGCTCCATGAGCGCTACTTGGCTCACGGCTG
TGTGGCCCAAGCGCACGGCCAGAGGGGTGGCAGCGACCCCCTGAGGCTGTTGCTGGCGTTGCACAGACGG
ATCCGTATTTTTCGCAAGATTATTTCCATCCTCTCGCGCCTGCTTTTCCAGCGCCTGCTGCCCTGTGGTG
TCATTAAGTTTCGGTACATCTGGATCTGCTGGTTCGCGGCGTTGGCGGCAGGGGGCGCCTACATCGGCGG
CGTCAGCCCTCGCCTGCAACTGCCCATTCTATTGCCACTTGGAGGCCAGTTCTTCCGTTCTAGCCATCCC
TTTGAACGCTTTGACGCAGAGTATCGCCAGCAGTTCCTGTTCGAGGATCTGCCTCCAAACGAGGGCGGCA
ACTTGCCAGTGGTTCTGGTGTGGGGAATCCTGCCAGTGGACACTAGTGATCCCCTGGACCCTCGCACCAA
CAGCTCAGTGGTAAGTGATCCTGACTTCTCGCCTAGCAGCCCGGAGGCCCAGGAGTGGCTCCTGGCTCTC
TGCCATGGAGCCCAGAATCAGAGCTTCTTTGGAGATCAGCCAGAGGGCTGGCCTACGCTGTGTTTAGTGG
AAGCCTTACAGCAGTGGATGGAGAGCCCTAGCTGTGGCCGCCTGGGTCCTGATCTATGCTGCGGACAATC
AGAATTCCCCTGGGCCCCCCAGCTTTACCTGCACTGTCTCAAGATGATGGCTCTGGAGCAAAGTCCTGAT
GGCACACGTGACCTGGGACTCCGCTTCGATACTCATGGCAACCTGGCAGCTCTAGTTCTAAAGTTCCAGA
CCAACTTACCCTACAGTACAGAGTACGGCCCGGTCCACCACTTCTACACTGAAATCAGCCGCTGGTTGTC
AACCGAGATGAGCAAGGCACCTCCTGGCCTCAACCAGGGTTGGTTCACCAGCAACTTGGAGCTGTACAGC
TTGCAGCATAGTCTAAGCACAGAGCCAGCTGTCGTGCTTGGTCTGGCCCTGGCACTAGCCTTTGCCACAC
TGCTGCTGAGCACCTGGAATGTCCCCCTCAGTCTGTTCTCTGTGGCAGCTGTGGCTGGCACCGTACTGCT
CACGGTGGGCTTGCTGGTTCTTCTTGAGTGGCAACTCAACACTGCCGAAGCTCTCTTTCTCTCTGCCTCT
GTGGGCCTCTCTGTAGACTTAACCATTAACTACTGCATCTCCTATCACTTGTGCCCACACCCGGACCGCC
TGAGCCGTGTGGCCTTCTCTTTACGTCAGATCAGCCGGGCCACGGCGATGACGACTGGAGTGTTGTTTGC
CTCTGGTGTGATCATGCTGCCTTCCACTATACTGCTCTATCGGAAGCTGGGCATCATCGTCATGATGGTC
AAGTTCCTTGGCTGTGGCTTTGCCAGCTTCTTCTTTCAGTCCCTGTGCTGTTTCTTCGGGCCAGAAAAGA
ACTGTGGCCAGATCCTCTGGCCCTGCGCCCATCTGCCGTGGGATGCCGGGACTGAGGATCCTGACGAGAA
GGGGCGAGCGGGGCCACCAGGATTCTCCGAACACTATGAGTTGCAGCCCCTGGCACGGCGCCGGAGTCCC
AGCTTCGACACCAGCACAGCCACCAGCAAGCTTTCCCATCGGCCTTCCATACTCTCTGAAGACCTGCAGA
TACATGATGGCAGCTGCTGCCTCCAGCATGCCCAAGCCCCTGTCTCCCCAAGGGATCTGCTCCTAGACCA
CCAGACAGTCTTCAGCCAGTGTCCAGCCCTGCAGACCTCCTCTCCATATAAGCAGGCTGGCCCCACCCCC
CAAACCTGGATCAGGCAAGATTCCCAGGGACAGAAAACTGAGCCCCTGCAGGCACTGCCAGAAGGCCCTG
CCCACTGCCCTAAGTCCAAAGTGGAAGAGCTCCCCGATGGCCTGTGCTCCTCAGCCAGCACCCTGGAGGG
ACTCAGCGTCTCAGATGACACCTGTGCCTCTGAGCATAGTGTCCGTGTGCCAGATTCTGTGGGTACCTCC
CCAGAAGTCATGAATGGCACTGGACACCCCATACTTGAGCGGGGCCAGCTGAATGGGAAGCGCGACACCC
TCTGGCTAGCACTGAAGGAGACCATCTATGACCCAAACATGCCCAATTCTCACCACAGCAGCTTATCCTG
GAAGGGCCGTGGAGGGCCAGGCGATATCAGCCCTGTGATGCTTCCCAACAGTCAGCCAGATCTCCCAGAT
GTTTGGCTCCGTAGGCCCAGCACCTACACCTCTGGCTACAGCAGCTGA

Translation (1345 aa):
MAPEASPERSCSLHTCPLEDPTGAPVPPPTVSTLQAIDPTSPLTAGHFAFPRAPQDYQEGSSLLGLGDQA
SLCAHVSNLSTSIDTSQHDGVWKQPSVQRHVVSVRQERTFRMPKSYSHMIADWPVAVIVGCLAFIFLCTL
AGLLGSPPLDFSEPLLGFEPRDTEIGRRLEVWKAMQALTGPKNLLSLSPDPEMNSSSLLSTLSPAAWGRA
EESVVRTKRMVGPVEVKEEENFFCGRPEKSHAKLVFVSTSGGSLWNLQAIHSMCRIEQEQIRSHISFGAL
CQRSAANECCPSWSLGNYLAVLSNRSSCQDTTQADTDRTLALLRFCATFYHRGVLVPACVGSSQDKPPFC
AQVPAKCTGSNVVYEFLHYLLDRDFLSPQTADYQVPSLKFALLFLPIIKTSSLLDIYLDGLGDPIKVSDN
YTSISGMDLGLKPRLLKYYLAEDTMYPLIALVVIFFGMSLYLRSLFITFMSLLGVLGSLMVAYFLYHVAF
RMAYFPFVNLAALLLLSGVCVNYTLIFLDMWRLSRGQVPSGGMPHRVGRTMHHFGYLLLVSGLTTSAAFY
GSYLSRLPAVRCFALFMGTAVLVHMGLTLLWLPATVVLHERYLAHGCVAQAHGQRGGSDPLRLLLALHRR
IRIFRKIISILSRLLFQRLLPCGVIKFRYIWICWFAALAAGGAYIGGVSPRLQLPILLPLGGQFFRSSHP
FERFDAEYRQQFLFEDLPPNEGGNLPVVLVWGILPVDTSDPLDPRTNSSVVSDPDFSPSSPEAQEWLLAL
CHGAQNQSFFGDQPEGWPTLCLVEALQQWMESPSCGRLGPDLCCGQSEFPWAPQLYLHCLKMMALEQSPD
GTRDLGLRFDTHGNLAALVLKFQTNLPYSTEYGPVHHFYTEISRWLSTEMSKAPPGLNQGWFTSNLELYS
LQHSLSTEPAVVLGLALALAFATLLLSTWNVPLSLFSVAAVAGTVLLTVGLLVLLEWQLNTAEALFLSAS
VGLSVDLTINYCISYHLCPHPDRLSRVAFSLRQISRATAMTTGVLFASGVIMLPSTILLYRKLGIIVMMV
KFLGCGFASFFFQSLCCFFGPEKNCGQILWPCAHLPWDAGTEDPDEKGRAGPPGFSEHYELQPLARRRSP
SFDTSTATSKLSHRPSILSEDLQIHDGSCCLQHAQAPVSPRDLLLDHQTVFSQCPALQTSSPYKQAGPTP
QTWIRQDSQGQKTEPLQALPEGPAHCPKSKVEELPDGLCSSASTLEGLSVSDDTCASEHSVRVPDSVGTS
PEVMNGTGHPILERGQLNGKRDTLWLALKETIYDPNMPNSHHSSLSWKGRGGPGDISPVMLPNSQPDLPD
VWLRRPSTYTSGYSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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