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Report for CCDS16194.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16194.2 Public Mus musculus 2 Ube2l6 23 108 98 CCDS HistoryNCBI Gene:56791Re-query CCDS DB by CCDS ID:16194.2Re-query CCDS DB by GeneID:56791See the combined annotation on chromosome 2 in Sequence Viewer

Public Note for CCDS 16194.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 16194.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000102642.8 ENSMUSP00000099702.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102642.8Link to Ensembl Protein Viewer:ENSMUSP00000099702.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000102642Re-query CCDS DB by Protein ID:ENSMUSP00000099702
Original member Current member NCBI NM_019949.2 NP_064333.2 Accepted alive Link to Nucleotide Sequence:NM_019949.2Link to Protein Sequence:NP_064333.2Re-query CCDS DB by Nucleotide ID:NM_019949Re-query CCDS DB by Protein ID:NP_064333Link to BLAST:NP_064333.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064333.2 153 Q9QZU9 153 100% 0 0

Chromosomal Locations for CCDS 16194.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 84798906 84798932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 84802779 84802874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 84806337 84806523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 84809005 84809156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (462 nt):
ATGATGGCCAGCAAGCGAGTGGCGAAAGAGCTGGAGAGTCTTTCGAAGGAGCTGCCGCCATACCTTCGCC
AACTGTCTAGTGACGATGCCAATGTGCTTGTGTGGCACATGCTCCTGCTGCCAGACCAGCTTCCCTATGG
CCTCAAAGCCTTCCAAGTGCGGATTGATTTCCCCAGGGAGTATCCATTCAAGCCTCCCACTTTGAGATTC
ACCACCAAGATCTACCACCCCAACGTCAGGGAGGATGGTCTGGTGTGCCTGCCCCTCATCAGCAATGAGA
ACTGGAAGCCTTACACCAAGCCTTATCAAGTCTTGGAGGCCCTCAATGTGCTGGTGAGTAAACCGAATCT
GGAAGAGCCTGTGCGTCTGGAACTTGCTGACCTCCTGACTCAGAACCCGGAGATGTTCAGGAAGAAGGCA
GAAGAGTTCACCCTTAAATTCGGAGTGGACCGGCCCTCTTAA

Translation (153 aa):
MMASKRVAKELESLSKELPPYLRQLSSDDANVLVWHMLLLPDQLPYGLKAFQVRIDFPREYPFKPPTLRF
TTKIYHPNVREDGLVCLPLISNENWKPYTKPYQVLEALNVLVSKPNLEEPVRLELADLLTQNPEMFRKKA
EEFTLKFGVDRPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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