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Report for CCDS15835.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15835.1 Public Mus musculus 2 Olfm1 23 108 98 CCDS HistoryNCBI Gene:56177Re-query CCDS DB by CCDS ID:15835.1Re-query CCDS DB by GeneID:56177See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15835.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000102879.3 ENSMUSP00000099943.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102879.3Link to Ensembl Protein Viewer:ENSMUSP00000099943.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000102879Re-query CCDS DB by Protein ID:ENSMUSP00000099943
Original member Current member NCBI NM_001038612.1 NP_001033701.1 Accepted alive Link to Nucleotide Sequence:NM_001038612.1Link to Protein Sequence:NP_001033701.1Re-query CCDS DB by Nucleotide ID:NM_001038612Re-query CCDS DB by Protein ID:NP_001033701Link to BLAST:NP_001033701.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001033701.1 153 O88998-2 153 100% 0 0

Chromosomal Locations for CCDS 15835.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 28205950 28206099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 28208078 28208227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 28212532 28212687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 28214101 28214106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (462 nt):
ATGTCGGTGCCGCTGCTGAAGATCGGGGTCGTGCTAAGCACCATGGCCATGATCACCAACTGGATGTCCC
AGACGCTGCCCTCGCTGGTGGGCCTCAATACCACCCGGCTTTCGGCCGCCAGCGGCGGGACGCTGGACCG
CAGCACCGGCGTGTTGCCCACCAACCCCGAGGAGAGCTGGCAGGTGTACAGCTCTGCCCAGGACAGTGAG
GGCAGGTGTATCTGCACAGTGGTCGCCCCCCAGCAGACCATGTGTTCGCGGGATGCCCGCACAAAACAGC
TGAGGCAGCTACTGGAGAAGGTGCAAAACATGTCTCAATCCATAGAAGTCTTGGACAGGCGAACTCAGAG
AGACCTGCAGTACGTGGAGAAGATGGAGAACCAGATGAAAGGCCTGGAGACCAAGTTCAAGCAGGTGGAG
GAGAGCCATAAGCAGCATCTAGCCAGGCAGTTCAAGGGCTAA

Translation (153 aa):
MSVPLLKIGVVLSTMAMITNWMSQTLPSLVGLNTTRLSAASGGTLDRSTGVLPTNPEESWQVYSSAQDSE
GRCICTVVAPQQTMCSRDARTKQLRQLLEKVQNMSQSIEVLDRRTQRDLQYVEKMENQMKGLETKFKQVE
ESHKQHLARQFKG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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