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Report for CCDS15686.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15686.1 Public Mus musculus 2 Il15ra 23 108 98 CCDS HistoryNCBI Gene:16169Re-query CCDS DB by CCDS ID:15686.1Re-query CCDS DB by GeneID:16169See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15686.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000078834.11 ENSMUSP00000077878.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000078834.11Link to Ensembl Protein Viewer:ENSMUSP00000077878.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000078834Re-query CCDS DB by Protein ID:ENSMUSP00000077878
Original member NCBI NM_008358.2 NP_032384.1 Updated not alive Link to Nucleotide Sequence:NM_008358.2Link to Protein Sequence:NP_032384.1Re-query CCDS DB by Nucleotide ID:NM_008358Re-query CCDS DB by Protein ID:NP_032384
Current member NCBI NM_008358.3 NP_032384.1 Accepted alive Link to Nucleotide Sequence:NM_008358.3Link to Protein Sequence:NP_032384.1Re-query CCDS DB by Nucleotide ID:NM_008358Re-query CCDS DB by Protein ID:NP_032384Link to BLAST:NP_032384.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032384.1 263 Q60819-1 263 100% 0 0

Chromosomal Locations for CCDS 15686.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 11705848 11705944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11718264 11718458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11720013 11720105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11723413 11723610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11724096 11724128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11730571 11730646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11733150 11733249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (792 nt):
ATGGCCTCGCCGCAGCTCCGGGGCTATGGAGTCCAGGCCATTCCTGTGTTGCTGCTGCTGCTGTTGCTAC
TGTTGCTCCCGCTGAGGGTGACGCCGGGCACCACGTGTCCACCTCCCGTATCTATTGAGCATGCTGACAT
CCGGGTCAAGAATTACAGTGTGAACTCCAGGGAGAGGTATGTCTGTAACTCTGGCTTTAAGCGGAAAGCT
GGAACATCCACCCTGATTGAGTGTGTGATCAACAAGAACACAAATGTTGCCCACTGGACAACTCCCAGCC
TCAAGTGCATCAGAGACCCCTCCCTAGCTCACTACAGTCCAGTGCCAACAGTAGTGACACCAAAGGTGAC
CTCACAGCCAGAGAGCCCCTCCCCCTCTGCAAAAGAGCCAGAAGCTTTCTCTCCCAAATCAGATACCGCA
ATGACCACAGAGACAGCTATTATGCCTGGCTCCAGGCTGACACCATCCCAAACAACTTCTGCAGGAACTA
CAGGGACAGGCAGTCACAAGTCCTCCCGAGCCCCATCTCTTGCAGCAACAATGACCTTGGAGCCTACAGC
CTCCACCTCCCTCAGGATAACAGAGATTTCTCCCCACAGTTCCAAAATGACGAAAGTGGCCATCTCTACA
TCGGTCCTCTTGGTTGGTGCAGGGGTTGTGATGGCTTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTT
CTCAGCCGTGCCGTGTTGAGGTGGAAACCATGGAAACAGTACCAATGACTGTGAGGGCCAGCAGCAAGGA
GGATGAAGACACAGGAGCCTAA

Translation (263 aa):
MASPQLRGYGVQAIPVLLLLLLLLLLPLRVTPGTTCPPPVSIEHADIRVKNYSVNSRERYVCNSGFKRKA
GTSTLIECVINKNTNVAHWTTPSLKCIRDPSLAHYSPVPTVVTPKVTSQPESPSPSAKEPEAFSPKSDTA
MTTETAIMPGSRLTPSQTTSAGTTGTGSHKSSRAPSLAATMTLEPTASTSLRITEISPHSSKMTKVAIST
SVLLVGAGVVMAFLAWYIKSRQPSQPCRVEVETMETVPMTVRASSKEDEDTGA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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