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Report for CCDS15475.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15475.1 Public Mus musculus 1 Fcrlb 23 108 98 CCDS HistoryNCBI Gene:435653Re-query CCDS DB by CCDS ID:15475.1Re-query CCDS DB by GeneID:435653See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15475.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000094337.1 ENSMUSP00000091895.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000094337.1Link to Ensembl Protein Viewer:ENSMUSP00000091895.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000094337Re-query CCDS DB by Protein ID:ENSMUSP00000091895
Original member Current member NCBI NM_001029984.2 NP_001025155.2 Accepted alive Link to Nucleotide Sequence:NM_001029984.2Link to Protein Sequence:NP_001025155.2Re-query CCDS DB by Nucleotide ID:NM_001029984Re-query CCDS DB by Protein ID:NP_001025155Link to BLAST:NP_001025155.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001025155.2 427 Q5DRQ8 427 100% 0 0

Chromosomal Locations for CCDS 15475.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 170907273 170907703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170907851 170908129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170908632 170908898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170912025 170912279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170912622 170912642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170912911 170912941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1284 nt):
ATGTGGATGCTTGCAGCCCTCCTGCTTCTGGTTCCAAGAAGTGGAAAAGCTGCTACTCTGGAGAAGCCTG
TACTGACTCTACACCCACCTTGGACCACCATCTTCAAGGGAGAGCGAGTAACCCTGAGATGTGATGGATA
CCACCCTCTGCTGCTGGAGCTCCGGCCCATTAGCACTCTCTGGTACCTGGGCCATGTCCTCCTGCCTTCC
CACAAGAAGAGCATCGAGGTGCAGGCACCAGGGGTGTATCGATGTCAGACACGAGGAGCACCCGTCAGTG
ATCCTATCCACCTCTCTGTGTCTAACGACTGGCTAATTCTGCAAGTGCCGTATGCTGCGGTGTTCGAGGG
AGAGCCCTTGGTGATGCGCTGCCGTGGCTGGTACGACAAAGTCGTCTACAAACTTCACTACTACCACGAC
GGCCAGGCTGTGAGATATTTCCACTCTAGCACCAACTACACGGTGCTGCAAGCGCGAGCCAGCGACAGCG
GTCACTACCAGTGCTCTGGCACCATGCGTATCCCAGTGGAGAGTGCGCCCATGTTCTCCTCCAAGGTGGC
CGTGACCGTGCAAGAGCTGTTCCAGACACCGGTGCTGAGGACGTTAAGCCCGCAGGAGGCGCGCGGCCGC
GTGGTGCTGCGCTGCGAGACGCGCCTGCACCCGCAGAAGCGGGACACGCCGCTGCAGTTCGCCTTCTACA
AGTACAGCCGGCCGGTGCGCCGCTTCGACTGGGGCGCCGAGTACACTGTCCCCGAGTCCGAGGTCGAGGA
GCTCGAATCGTACTGGTGTGAGGCCGCCACCACCAGCCGGAGTGTACGGAAACGCAGCCCGTGGCTGCAG
CTCCCTGGGCGGGGCCCTGTCCTGGATCTGGCGTCCACCACCGCGCCAGTCGCACAGGCTGCAGCCTTGG
GGCCGGGGGACAAGCCGCTTTCCTTCCGGAAGACCCCAGTGTCCAGATCCGTTCAGTCAGTCACTTCCAT
CCCGAACAGCACCTTTGCAGGGCTGCAGTTCCCCGCGGGCCATGTTGCCACCGCCGGGCCACACGCCTGC
GCGCCCCTGCCAGCGTCCGCGGAGCAGTCGCGCGAAGCTCTTCAGCCCAAGGTGGACCTCCTGCTTCGCG
AGATGCAGCTGCTCAAAGGCCTTCTGAGCCGCGTGGTCCTGGGATTAAAGGACCCACAGGCCCTCCATGA
GCTTACAGAGACCCCCGAGACACCCAATTCTCACGTTACTGTGAACCCCGCAACCCCAGAGACCACTGTC
ATGGAGGGCCGAGTGGACAGCTAG

Translation (427 aa):
MWMLAALLLLVPRSGKAATLEKPVLTLHPPWTTIFKGERVTLRCDGYHPLLLELRPISTLWYLGHVLLPS
HKKSIEVQAPGVYRCQTRGAPVSDPIHLSVSNDWLILQVPYAAVFEGEPLVMRCRGWYDKVVYKLHYYHD
GQAVRYFHSSTNYTVLQARASDSGHYQCSGTMRIPVESAPMFSSKVAVTVQELFQTPVLRTLSPQEARGR
VVLRCETRLHPQKRDTPLQFAFYKYSRPVRRFDWGAEYTVPESEVEELESYWCEAATTSRSVRKRSPWLQ
LPGRGPVLDLASTTAPVAQAAALGPGDKPLSFRKTPVSRSVQSVTSIPNSTFAGLQFPAGHVATAGPHAC
APLPASAEQSREALQPKVDLLLREMQLLKGLLSRVVLGLKDPQALHELTETPETPNSHVTVNPATPETTV
MEGRVDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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