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Report for CCDS15464.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15464.1 Public Mus musculus 1 Rgs5 23 108 98 CCDS HistoryNCBI Gene:19737Re-query CCDS DB by CCDS ID:15464.1Re-query CCDS DB by GeneID:19737See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15464.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027997.8 ENSMUSP00000027997.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027997.8Link to Ensembl Protein Viewer:ENSMUSP00000027997.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000027997Re-query CCDS DB by Protein ID:ENSMUSP00000027997
Original member NCBI NM_009063.4 NP_033089.2 Updated not alive Link to Nucleotide Sequence:NM_009063.4Link to Protein Sequence:NP_033089.2Re-query CCDS DB by Nucleotide ID:NM_009063Re-query CCDS DB by Protein ID:NP_033089
Current member NCBI NM_009063.5 NP_033089.2 Accepted alive Link to Nucleotide Sequence:NM_009063.5Link to Protein Sequence:NP_033089.2Re-query CCDS DB by Nucleotide ID:NM_009063Re-query CCDS DB by Protein ID:NP_033089Link to BLAST:NP_033089.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033089.2 181 O08850 181 100% 0 0

Chromosomal Locations for CCDS 15464.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 169655578 169655621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169676827 169676937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169682755 169682816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169690416 169690582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169692179 169692340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (546 nt):
ATGTGTAAGGGACTGGCAGCTCTGCCGCACTCATGCCTGGAAAGGGCCAAGGAGATCAAGATCAAGTTGG
GAATTCTCCTCCAGAAGCCAGACTCTGCTGTTGACCTTGTCATTCCATACAATGAGAAGCCAGAGAAGCC
TGCCAAGGCACACAAGCCCTCACTGGAGGAGGTCCTGCAGTGGCGCCAGTCCCTGGACAAGCTTCTCCAG
AACAGCTATGGATTTGCCAGCTTCAAAAGTTTCCTGAAGTCTGAATTCAGTGAGGAAAACCTTGAGTTCT
GGGTTGCCTGTGAGAATTACAAGAAGATCAAGTCCCCCATCAAAATGGCGGAGAAGGCAAAGCAAATTTA
TGAAGAATTCATCCAGACAGAGGCCCCTAAAGAGGTGAACATTGACCACTTCACTAAAGACATCACCATG
AAGAACCTGGTGGAACCGTCTCCTCGCAGCTTTGACTTGGCCCAGAAAAGGATCTATGCCCTGATGGAGA
AGGATTCTCTGCCCCGCTTTGTGCGCTCTGAATTTTATAAGGAGCTAATCAAGTAG

Translation (181 aa):
MCKGLAALPHSCLERAKEIKIKLGILLQKPDSAVDLVIPYNEKPEKPAKAHKPSLEEVLQWRQSLDKLLQ
NSYGFASFKSFLKSEFSEENLEFWVACENYKKIKSPIKMAEKAKQIYEEFIQTEAPKEVNIDHFTKDITM
KNLVEPSPRSFDLAQKRIYALMEKDSLPRFVRSEFYKELIK


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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