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Report for CCDS15455.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15455.1 Public Mus musculus 1 Uck2 23 108 98 CCDS HistoryNCBI Gene:80914Re-query CCDS DB by CCDS ID:15455.1Re-query CCDS DB by GeneID:80914See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15455.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000053686.8 ENSMUSP00000060202.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000053686.8Link to Ensembl Protein Viewer:ENSMUSP00000060202.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000053686Re-query CCDS DB by Protein ID:ENSMUSP00000060202
Original member NCBI NM_030724.3 NP_109649.1 Updated not alive Link to Nucleotide Sequence:NM_030724.3Link to Protein Sequence:NP_109649.1Re-query CCDS DB by Nucleotide ID:NM_030724Re-query CCDS DB by Protein ID:NP_109649
Current member NCBI NM_030724.4 NP_109649.1 Accepted alive Link to Nucleotide Sequence:NM_030724.4Link to Protein Sequence:NP_109649.1Re-query CCDS DB by Nucleotide ID:NM_030724Re-query CCDS DB by Protein ID:NP_109649Link to BLAST:NP_109649.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_109649.1 261 Q99PM9 261 100% 0 0

Chromosomal Locations for CCDS 15455.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 167226382 167226521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167227732 167227780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167229893 167229990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167234692 167234834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167236603 167236699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167237489 167237648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167284776 167284874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (786 nt):
ATGGCCGGGGACAGCGAGCAGACCCTGCAGAACCACCAGCAGCCCAACGGCGGCGAGCCCTTCCTGATCG
GCGTGAGCGGGGGCACGGCCAGCGGGAAGTCTTCCGTTTGTGCTAAGATCGTCCAGCTTTTGGGGCAGAA
TGAGGTGGATTACCACCAGAAGCAGGTGGTGATCCTGAGCCAGGATAGCTTCTACCGAGTCCTCACCTCA
GAGCAGAAGGCCAAAGCCCTCAAGGGCCAATTCAACTTTGATCACCCGGATGCCTTTGACAACGAACTCA
TCTTCAAAACACTCAAAGAAATCACCGAAGGAAAAACCGTCCAGATCCCCGTGTACGACTTTGTCTCCCA
CTCACGGAAAGAGGAGACGGTCACCATCTACCCCGCCGACGTGGTGCTCTTCGAAGGGATCCTAGCCTTC
TATTCCCAGGAGGTCCGAGACCTGTTCCAGATGAAGCTTTTTGTGGACACAGATGCGGATACCCGTCTGT
CTCGCCGAGTATTGAGGGACATCAGCGAAAGAGGGAGGGACCTTGAGCAGATTTTATCACAGTACATTAC
GTTTGTGAAGCCTGCCTTTGAGGAATTCTGCTTGCCAACAAAGAAATACGCCGATGTGATCATTCCTAGA
GGTGCCGACAATCTCGTGGCCATCAACCTCATCGTGCAACACATCCAGGACATCCTCAACGGGGGGCTCT
CCAAGCGGCAGACGAACGGCTATCTCAACGGCTACACCCCTTCCCGCAAGAGGCAGGCGTCAGAGTCCAG
CAGCCGACCACATTGA

Translation (261 aa):
MAGDSEQTLQNHQQPNGGEPFLIGVSGGTASGKSSVCAKIVQLLGQNEVDYHQKQVVILSQDSFYRVLTS
EQKAKALKGQFNFDHPDAFDNELIFKTLKEITEGKTVQIPVYDFVSHSRKEETVTIYPADVVLFEGILAF
YSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCLPTKKYADVIIPR
GADNLVAINLIVQHIQDILNGGLSKRQTNGYLNGYTPSRKRQASESSSRPH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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