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Report for CCDS154.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
154.1 Public Homo sapiens 1 TMEM51 24 110 108 CCDS HistoryNCBI Gene:55092Re-query CCDS DB by CCDS ID:154.1Re-query CCDS DB by GeneID:55092See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 154.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376008.3 ENSP00000365176.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376008.3Link to Ensembl Protein Viewer:ENSP00000365176.1Re-query CCDS DB by Nucleotide ID:ENST00000376008Re-query CCDS DB by Protein ID:ENSP00000365176
Original member Current member EBI ENST00000376014.7 ENSP00000365182.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376014.7Link to Ensembl Protein Viewer:ENSP00000365182.3Re-query CCDS DB by Nucleotide ID:ENST00000376014Re-query CCDS DB by Protein ID:ENSP00000365182
Original member Current member EBI ENST00000400796.7 ENSP00000383600.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000400796.7Link to Ensembl Protein Viewer:ENSP00000383600.2Re-query CCDS DB by Nucleotide ID:ENST00000400796Re-query CCDS DB by Protein ID:ENSP00000383600
Original member Current member EBI ENST00000428417.5 ENSP00000394899.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000428417.5Link to Ensembl Protein Viewer:ENSP00000394899.1Re-query CCDS DB by Nucleotide ID:ENST00000428417Re-query CCDS DB by Protein ID:ENSP00000394899
Original member Current member NCBI NM_001136216.2 NP_001129688.1 Accepted alive Link to Nucleotide Sequence:NM_001136216.2Link to Protein Sequence:NP_001129688.1Re-query CCDS DB by Nucleotide ID:NM_001136216Re-query CCDS DB by Protein ID:NP_001129688Link to BLAST:NP_001129688.1
Original member Current member NCBI NM_001136217.2 NP_001129689.1 Accepted alive Link to Nucleotide Sequence:NM_001136217.2Link to Protein Sequence:NP_001129689.1Re-query CCDS DB by Nucleotide ID:NM_001136217Re-query CCDS DB by Protein ID:NP_001129689Link to BLAST:NP_001129689.1
Original member Current member NCBI NM_001136218.2 NP_001129690.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001136218.2Link to Protein Sequence:NP_001129690.1Re-query CCDS DB by Nucleotide ID:NM_001136218Re-query CCDS DB by Protein ID:NP_001129690Link to BLAST:NP_001129690.1
Original member Current member NCBI NM_018022.3 NP_060492.1 Accepted alive Link to Nucleotide Sequence:NM_018022.3Link to Protein Sequence:NP_060492.1Re-query CCDS DB by Nucleotide ID:NM_018022Re-query CCDS DB by Protein ID:NP_060492Link to BLAST:NP_060492.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129688.1 253 Q9NW97 253 100% 0 0
NP_001129689.1 253 Q9NW97 253 100% 0 0
NP_001129690.1 253 Q9NW97 253 100% 0 0
NP_060492.1 253 Q9NW97 253 100% 0 0

Chromosomal Locations for CCDS 154.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 15215088 15215431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15219326 15219743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (762 nt):
ATGATGGCCCAGTCCAAGGCCAATGGCTCGCACTATGCGCTGACCGCCATCGGCCTGGGGATGCTGGTCC
TTGGGGTGATCATGGCCATGTGGAACCTGGTACCCGGCTTCAGCGCGGCCGAGAAGCCAACAGCTCAGGG
CAGCAACAAGACCGAGGTGGGTGGCGGCATCCTCAAGAGCAAGACCTTCTCTGTGGCCTACGTGCTGGTC
GGGGCCGGGGTGATGCTGCTGCTGCTTTCTATCTGCCTGAGTATCAGGGATAAGAGGAAGCAGCGGCAGG
GCGAGGACCTGGCCCATGTCCAGCACCCGACAGGCGCTGGGCCTCACGCCCAGGAGGAAGACAGCCAGGA
GGAAGAAGAGGAGGATGAGGAGGCTGCCTCAAGGTACTATGTTCCCAGCTACGAGGAAGTGATGAACACA
AACTACTCAGAAGCAAGGGGAGAGGAGCAGAACCCGAGGTTGAGCATCTCTCTCCCGTCCTATGAGTCAC
TGACGGGGCTCGACGAGACCACCCCCACATCCACCAGGGCTGACGTGGAGGCCAGCCCTGGGAACCCCCC
TGACAGGCAGAACTCTAAGTTGGCCAAACGACTGAAACCGCTGAAAGTTCGAAGGATTAAATCTGAAAAG
CTTCACCTCAAAGACTTTAGGATCAACCTCCCAGACAAAAACGTCCCTCCTCCCTCGATAGAGCCTTTGA
CTCCTCCACCGCAGTATGATGAAGTCCAGGAGAAGGCCCCCGACACCCGGCCGCCCGACTGA

Translation (253 aa):
MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKSKTFSVAYVLV
GAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNT
NYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVEASPGNPPDRQNSKLAKRLKPLKVRRIKSEK
LHLKDFRINLPDKNVPPPSIEPLTPPPQYDEVQEKAPDTRPPD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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