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Report for CCDS15350.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15350.1 Public Mus musculus 1 Rgs18 23 108 98 CCDS HistoryNCBI Gene:64214Re-query CCDS DB by CCDS ID:15350.1Re-query CCDS DB by GeneID:64214See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15350.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027603.3 ENSMUSP00000027603.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027603.3Link to Ensembl Protein Viewer:ENSMUSP00000027603.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000027603Re-query CCDS DB by Protein ID:ENSMUSP00000027603
Original member NCBI NM_022881.5 NP_075019.1 Updated not alive Link to Nucleotide Sequence:NM_022881.5Link to Protein Sequence:NP_075019.1Re-query CCDS DB by Nucleotide ID:NM_022881Re-query CCDS DB by Protein ID:NP_075019
Current member NCBI NM_022881.6 NP_075019.1 Accepted alive Link to Nucleotide Sequence:NM_022881.6Link to Protein Sequence:NP_075019.1Re-query CCDS DB by Nucleotide ID:NM_022881Re-query CCDS DB by Protein ID:NP_075019Link to BLAST:NP_075019.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075019.1 235 Q99PG4 235 100% 0 0

Chromosomal Locations for CCDS 15350.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 144753812 144754069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 144755923 144756089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 144773521 144773582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 144774567 144774668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 144775123 144775241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (708 nt):
ATGGATATGTCACTGGTTTTCTTCTCTCAATTAAATATGTGTGAATCAAAAGAGAAAACTTTTTTCAAAC
TAATGCATGGGTCAGGGAAAGAAGAAACAAGCATCGAGGCCAAAATCAGAGCGAAAGAAAAAAGGAATAG
ACTAAGTCTTCTCCTACAGAGGCCTGACTTCCATGGAGAGACTCAAGCCAGTAGATCTGCCCTCTTGGCC
AAAGAAACAAGAGTCTCTCCTGAAGAAGCAGTGAAATGGGCTGAATCATTTGACAAATTGCTCTCTCATA
GAGATGGAGTGGATGCTTTTACCAGATTTCTTAAAACTGAATTCAGTGAGGAGAACATTGAATTTTGGGT
CGCCTGTGAAGACTTCAAGAAATGCAAGGAACCTCAACAAATCATCCTAAAAGCAAAGGCAATCTATGAG
AAATTCATTCAGAATGATGCCCCCAAAGAGGTTAACATTGATTTTCATACTAAAGAAGTAATTGCTAAGA
GCATCGCCCAGCCCACTCTCCACAGTTTTGATACGGCACAAAGCAGAGTGTACCAGCTCATGGAACATGA
CAGTTATAAACGCTTTTTGAAATCTGAGACCTACTTACATTTGATAGAAGGAAGACCTCAGAGACCAACA
AACCTTAGGAGACGATCACGATCATTTACTTACAATGATTTCCAAGATGTAAAGTCAGATGTTGCCATTT
GGTTATGA

Translation (235 aa):
MDMSLVFFSQLNMCESKEKTFFKLMHGSGKEETSIEAKIRAKEKRNRLSLLLQRPDFHGETQASRSALLA
KETRVSPEEAVKWAESFDKLLSHRDGVDAFTRFLKTEFSEENIEFWVACEDFKKCKEPQQIILKAKAIYE
KFIQNDAPKEVNIDFHTKEVIAKSIAQPTLHSFDTAQSRVYQLMEHDSYKRFLKSETYLHLIEGRPQRPT
NLRRRSRSFTYNDFQDVKSDVAIWL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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