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Report for CCDS15286.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15286.1 Public Mus musculus 1 Rbbp5 23 108 98 CCDS HistoryNCBI Gene:213464Re-query CCDS DB by CCDS ID:15286.1Re-query CCDS DB by GeneID:213464See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15286.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000190997.6 ENSMUSP00000141003.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000190997.6Link to Ensembl Protein Viewer:ENSMUSP00000141003.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000190997Re-query CCDS DB by Protein ID:ENSMUSP00000141003
Original member Current member NCBI NM_172517.2 NP_766105.2 Accepted alive Link to Nucleotide Sequence:NM_172517.2Link to Protein Sequence:NP_766105.2Re-query CCDS DB by Nucleotide ID:NM_172517Re-query CCDS DB by Protein ID:NP_766105Link to BLAST:NP_766105.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766105.2 538 Q8BX09-1 538 100% 0 0

Chromosomal Locations for CCDS 15286.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 132477509 132477527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132484052 132484077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132484746 132484918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132489588 132489728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132490423 132490585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132492553 132492662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132493815 132493934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132494021 132494174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132494270 132494341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132494857 132494974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132496206 132496275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132496799 132497028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132497930 132498121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132503764 132503792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1617 nt):
ATGAACCTCGAGTTGCTGGAGTCCTTTGGACAGAACTACCCAGAGGAAGCTGATGGGACTCTGGACTGCA
TCAGCATGGCCCTGACCTGCACCTTTAACAGGTGGGGCACACTGCTTGCTGTTGGCTGTAACGATGGCCG
GATTGTTATTTGGGATTTCTTGACCAGAGGCATTGCTAAAATAATTAGTGCACACATCCATCCAGTCTGT
TCTTTGTGTTGGAGCCGAGATGGTCATAAGCTTGTGAGTGCTTCTACAGATAACATAGTGTCACAGTGGG
ATGTTCTTTCAGGAGATTGCGACCAGAGGTTTCGATTCCCTTCACCCATCTTAAAAGTCCAATATCATCC
TCGAGATCAGAACAAGGTTCTCGTGTGTCCCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAGATTCC
AAACATGTTGTTCTGCCGGTAGACGATGACTCGGATTTGAACGTGGTGGCATCTTTTGATAGGCGAGGGG
AATATATTTATACAGGAAATGCAAAAGGCAAGATCTTGGTCCTAAAAACAGACTCTCAGGATCTTGTTGC
TTCCTTCAGAGTAACAACTGGGACAAGCAATACTACCGCCATTAAATCAATTGAGTTTGCCCGGAAGGGG
AGTTGCTTCCTGATTAACACAGCAGATCGAATAATAAGAGTCTATGACGGCAGAGAGATTTTAACGTGTG
GAAGGGATGGAGAGCCAGAGCCTATGCAGAAGCTGCAGGACTTGGTGAATAGGACTCCATGGAAAAAATG
TTGTTTCTCTGGGGATGGGGAGTACATAGTGGCGGGCTCTGCGAGGCAGCATGCGCTGTATATCTGGGAA
AAGAGCATTGGCAACCTGGTGAAGATCTTACATGGGACCAGAGGGGAACTCCTGCTGGACGTGGCTTGGC
ATCCAGTCCGACCCATCATAGCTTCTATCTCTAGTGGAGTGGTGTCCATTTGGGCCCAAAATCAAGTAGA
AAATTGGAGTGCATTTGCACCAGACTTCAAAGAGTTGGATGAAAATGTAGAATATGAGGAAAGAGAATCA
GAATTTGATATTGAGGATGAAGATAAGAGTGAGCCTGAGCAAACAGGGGCTGATGCTGCTGAAGATGAGG
AAGTGGATGTCACCAGCGTGGATCCCATCGCTGCCTTCTGTAGCAGTGATGAAGAGCTGGAAGATTCAAA
GGCTCTATTGTATTTACCCATTGCCCCTGAGGTAGAAGACCCTGAAGAAAACCCGTATGGCCCTCCACCG
GATGCAGTCCCAAGCTCCTTGATGGATGAAGGGGCTAGTTCAGAGAAGAAGAGGCAGTCTTCAGCAGATG
GATCCCAGCCACCAAAGAAGAAACCTAAAACCACCAATATAGAGCTCCAAGGAGTGCCGAATGATGAAGT
CCATCCACTACTGGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGATCA
AAAGGTAAAGAGAAAGATTCTCCATTTAAACCGAAACTCTACAAAGGGGACAGAGGTTTACCTCTGGAAG
GATCAACGAAGGGTAAAGTGCAGGCGGAACTCAGCCAGTCCTTGGCAGCAGGAGGAGCCATCTCAGAACT
GCTGTGA

Translation (538 aa):
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVC
SLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNKVLVCPMKSAPVMLTLSDS
KHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKG
SCFLINTADRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWE
KSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERES
EFDIEDEDKSEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPPP
DAVPSSLMDEGASSEKKRQSSADGSQPPKKKPKTTNIELQGVPNDEVHPLLGVKGDGKSKKKQAGRPKGS
KGKEKDSPFKPKLYKGDRGLPLEGSTKGKVQAELSQSLAAGGAISELL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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