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Report for CCDS15283.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15283.1 Public Mus musculus 1 Nuak2 23 108 98 CCDS HistoryNCBI Gene:74137Re-query CCDS DB by CCDS ID:15283.1Re-query CCDS DB by GeneID:74137See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15283.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000082125.5 ENSMUSP00000080769.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000082125.5Link to Ensembl Protein Viewer:ENSMUSP00000080769.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000082125Re-query CCDS DB by Protein ID:ENSMUSP00000080769
Original member NCBI NM_028778.4 NP_083054.1 Updated not alive Link to Nucleotide Sequence:NM_028778.4Link to Protein Sequence:NP_083054.1Re-query CCDS DB by Nucleotide ID:NM_028778Re-query CCDS DB by Protein ID:NP_083054
Current member NCBI NM_028778.5 NP_083054.1 Accepted alive Link to Nucleotide Sequence:NM_028778.5Link to Protein Sequence:NP_083054.1Re-query CCDS DB by Nucleotide ID:NM_028778Re-query CCDS DB by Protein ID:NP_083054Link to BLAST:NP_083054.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083054.1 631 Q8BZN4-2 631 100% 0 0

Chromosomal Locations for CCDS 15283.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 132316230 132316472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132324953 132325073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132327697 132327848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132328131 132328196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132329958 132330077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132330559 132330691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132331321 132332381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1896 nt):
ATGGAGTCGGTGGCCTTACTCCAGCGCCCGAGCCAGGCTCCCTCGGCCTCCGCCCTGGCCTCGGAGAGCG
CCCGGCCGCTGGCGGACGGGCTCATCAAGTCGCCTAAACCTCTGATGAAGAAGCAGGCGGTGAAGCGGCA
CCATCACAAACACAACCTGCGGCACCGCTACGAGTTCCTGGAGACGCTGGGCAAGGGCACCTACGGGAAG
GTGAAGAAGGCACGAGAGAGCTCGGGGCGTCTGGTGGCCATCAAGTCCATCAGGAAAGACAAAATCAAAG
ATGAGCAGGATCTGCTGCACATACGGAGGGAGATTGAGATCATGTCTTCACTCAACCACCCCCACATCAT
TGCCATCCATGAAGTGTTTGAGAATAGCAGCAAGATTGTGATTGTCATGGAGTATGCCAGCCGAGGCGAT
CTGTATGATTACATCAGTGAGCGGCCACGGCTGAGTGAGCGGGACGCCAGGCATTTCTTCCGACAGATCG
TGTCTGCCCTGCACTACTGCCACCAGAACGGGATCGTTCACCGAGATCTCAAGCTGGAAAACATCCTTCT
AGATGCCAATGGAAACATCAAGATTGCTGACTTTGGCCTCTCCAACCTGTACCACAAAGGCAAGTTCCTC
CAGACGTTCTGTGGGAGCCCTCTCTACGCCTCGCCTGAGATAGTCAACGGGAAGCCCTATGTGGGCCCAG
AGGTGGACAGCTGGTCTCTGGGCGTTCTCCTGTACATCCTGGTGCATGGCACCATGCCCTTTGACGGGCA
GGATCATAAAACACTGGTGAAGCAAATCAGTAACGGGGCTTACCGTGAGCCGCCCAAGCCGTCCGATGCC
TGTGGCCTGATCCGGTGGCTGTTAATGGTGAACCCCACCCGTCGGGCCACACTGGAGGATGTAGCCAGTC
ATTGGTGGGTCAACTGGGGTTACACCACCGGAGTCGGGGAACAGGAAGCCCTGCGTGAGGGTGGGCACCC
TAGTGGTGACTTTGGCCGGGCCTCCATGGCGGACTGGTTACGTCGCTCCTCGCGCCCCCTCCTGGAGAAT
GGAGCCAAGGTGTGCAGCTTCTTCAAGCAGCACGTGCCGGGAGGTGGAAGCACTGTACCTGGGCTGGAGC
GGCAACATTCTCTTAAGAAGTCCCGAAAGGAGAATGACATGGCTCAAAATCTGCAAGGTGACCCGGCTGA
GGATACCTCTTCTCGCCCTGGCAAGAGCAGCCTTAAGCTTCCGAAAGGCATTCTCAAGAAAAAGTCCTCT
ACCTCGTCAGGGGAGGTACAGGAGGACCCTCAGGAACTCAGACCGGTGCCTGATACTCCAGGGCAGCCTG
TCCCTGCTGTATCCCTGCTCCCAAGGAAAGGCATCCTTAAGAAGTCTCGACAGCGTGAATCTGGTTACTA
CTCCTCTCCAGAGCCCAGCGAGTCTGGGGAACTCTTAGACGCCAGTGATGTGTTTGTGAGTGGGGACCCC
GTGGAGCAGAAGTCTCCACAGGCTTCAGGGCTCCTCCTCCACCGCAAGGGCATTCTCAAACTCAATGGCA
AGTTCTCCCGCACAGCCTTAGAAGGCACTACCCCTAGCACCTTTGGCTCCCTGGACCAACTGGCCTCCTC
CCATCCTGCAGCCCGGCCCAGCCGCCCCTCAGGGGCTGTGAGTGAGGACAGCATCCTGTCCTCCGAGTCC
TTTGACCAATTGGACTTGCCTGAACGTCTTCCCGAAACCCCACTGAGGGGCTGTGTGTCTGTGGACAACC
TGAGGGGGCTTGAGCAGCCTCCCTCAGAAGGTCTGAAGCGATGGTGGCAGGAATCCTTGGGGGATAGCTG
CTTTTCTCTGACAGACTGCCAAGAGGTGACTGCAGCCTACAGACAAGCCCTAGGAATCTGCTCAAAGCTC
AGCTGA

Translation (631 aa):
MESVALLQRPSQAPSASALASESARPLADGLIKSPKPLMKKQAVKRHHHKHNLRHRYEFLETLGKGTYGK
VKKARESSGRLVAIKSIRKDKIKDEQDLLHIRREIEIMSSLNHPHIIAIHEVFENSSKIVIVMEYASRGD
LYDYISERPRLSERDARHFFRQIVSALHYCHQNGIVHRDLKLENILLDANGNIKIADFGLSNLYHKGKFL
QTFCGSPLYASPEIVNGKPYVGPEVDSWSLGVLLYILVHGTMPFDGQDHKTLVKQISNGAYREPPKPSDA
CGLIRWLLMVNPTRRATLEDVASHWWVNWGYTTGVGEQEALREGGHPSGDFGRASMADWLRRSSRPLLEN
GAKVCSFFKQHVPGGGSTVPGLERQHSLKKSRKENDMAQNLQGDPAEDTSSRPGKSSLKLPKGILKKKSS
TSSGEVQEDPQELRPVPDTPGQPVPAVSLLPRKGILKKSRQRESGYYSSPEPSESGELLDASDVFVSGDP
VEQKSPQASGLLLHRKGILKLNGKFSRTALEGTTPSTFGSLDQLASSHPAARPSRPSGAVSEDSILSSES
FDQLDLPERLPETPLRGCVSVDNLRGLEQPPSEGLKRWWQESLGDSCFSLTDCQEVTAAYRQALGICSKL
S


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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