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Report for CCDS15185.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15185.1 Public Mus musculus 1 Mab21l4 23 108 98 CCDS HistoryNCBI Gene:71874Re-query CCDS DB by CCDS ID:15185.1Re-query CCDS DB by GeneID:71874See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15185.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000043718.11 ENSMUSP00000035332.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043718.11Link to Ensembl Protein Viewer:ENSMUSP00000035332.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000043718Re-query CCDS DB by Protein ID:ENSMUSP00000035332
Original member Current member EBI ENSMUST00000143419.1 ENSMUSP00000115971.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000143419.1Link to Ensembl Protein Viewer:ENSMUSP00000115971.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000143419Re-query CCDS DB by Protein ID:ENSMUSP00000115971
Original member NCBI NM_001159940.1 NP_001153412.1 Updated not alive Link to Nucleotide Sequence:NM_001159940.1Link to Protein Sequence:NP_001153412.1Re-query CCDS DB by Nucleotide ID:NM_001159940Re-query CCDS DB by Protein ID:NP_001153412
Current member NCBI NM_001159940.2 NP_001153412.1 Accepted alive Link to Nucleotide Sequence:NM_001159940.2Link to Protein Sequence:NP_001153412.1Re-query CCDS DB by Nucleotide ID:NM_001159940Re-query CCDS DB by Protein ID:NP_001153412Link to BLAST:NP_001153412.1
Original member NCBI NM_172411.4 NP_765999.3 Updated not alive Link to Nucleotide Sequence:NM_172411.4Link to Protein Sequence:NP_765999.3Re-query CCDS DB by Nucleotide ID:NM_172411Re-query CCDS DB by Protein ID:NP_765999
Current member NCBI NM_172411.5 NP_765999.3 Accepted alive Link to Nucleotide Sequence:NM_172411.5Link to Protein Sequence:NP_765999.3Re-query CCDS DB by Nucleotide ID:NM_172411Re-query CCDS DB by Protein ID:NP_765999Link to BLAST:NP_765999.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001153412.1 452 Q8CEZ4 452 100% 0 0
NP_765999.3 452 Q8CEZ4 452 100% 0 0

Chromosomal Locations for CCDS 15185.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 93152008 93152100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93152917 93153273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93154487 93154640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93155979 93156204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93159601 93160129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1359 nt):
ATGCCTGGCTCAGAGATGCCTGCTCCCTGTGTCTTTGCTCCAGACATGGCGGAGCAGGTGCCCCTGTGGC
ATCACTACCTGTTGGCCATCCAGTCACGGGAGTCACCCCGTGTCCAGGACTACCAGAGAGCGGAGAATAT
CTTGCTTACGGTGCTGGAACGCGTCCATGCCTTGGACTCCCGCTTCATTGTTGACTATTCTAGAGACCTG
GAGGCCTTCCAGTTTGCCCTGCGTTCCTCAGAGGACCCACTGGATGTGGAGGTGCTCCTGGGGGTGGATT
CGGAGGCTCTCCTGATCGAGGAGTCAGAAGCCACTGAGCCAGGGGATGGCCCTGCAATCTGTCGCCTGGG
TGTCCTCAAGGAGGCATCTGGCCTGGAGCCATGGATGACTGCTGACATCTTCAGTGTCTCCTCAGAGGAC
AGAGACAAGTGCTGTGGCCACCTTGTACCCAGTAAAGTCCTGTGTGTCCTCAAAGATCTTCTGGTGGCTG
CCATTGTACATTGCAAGCACCACAGGCTCATTCCACCAGGTTCACTGAATGCTGCTAATCTGAAGGAAGG
GCAGATGCGCCTGTCTCTGCTGGTGTCCAGTGGCTGGAGGAAGATCCGCTTCAACGTTGTGCCCGTGGTG
AGGAAGAAGCACCGGGTGCCTGCCTTGGAGGGGGCCCAGTTGAAGCTTGGATTTCCTGAGGGCATCTTGA
GAAGAATTGCCAGCCACGGGGTGGACCTGGTACCAGCTAATGCCCAGCACTGGAGGATCTCCACTGGCTA
CCTGCTCAGTCGCCTGCTTGATGCACTAGGCTCCCTCCCTGGCCACCGCCTGGACAGCCTCTCCATTCTC
GACCGCGTAAACCTAGAAAGTTGGCAAGGTGGCAGCCAGAACCATGGCCTAACTTTTGACCACCTGAAGA
CAGTGCTGCTGTGGGCCTCTACGCTGTTCCCAGCACCAGAGGACTGGGCTGACCTGCAGGGCTCAGTGTA
CCGCCAGCTGGTGGTGCTGCTCTGCTGCCTGGCTACCAGGAAGCTGCCCCACTTCCTGTACCCGGAGCAC
AACTTGCTGCAGGATGGTGGCCTGGACCTTGGCGCCATCTACCAACGAGTAGAACACTTCGCCAGCCAGC
CCGAAGAGTCCTTACGAATCCATGTCACCCACCTGGGCCCCAGCCGTCCACCACGCATCGACAATGGTGT
CAAAGCGCTACTGCAGCTCCCAGCCAGCGACCCTACCTACTGGGCCACCGCCTACTTTGACTTTCTGCTA
GATAAGTTCCAGGTCTTCAACATCCAGGATAAGGACAGAATCTCAGCCATGCAGAACATCTTCCAGAAGA
CCAAGACCATGGGGAGTGAGAACAGCTGA

Translation (452 aa):
MPGSEMPAPCVFAPDMAEQVPLWHHYLLAIQSRESPRVQDYQRAENILLTVLERVHALDSRFIVDYSRDL
EAFQFALRSSEDPLDVEVLLGVDSEALLIEESEATEPGDGPAICRLGVLKEASGLEPWMTADIFSVSSED
RDKCCGHLVPSKVLCVLKDLLVAAIVHCKHHRLIPPGSLNAANLKEGQMRLSLLVSSGWRKIRFNVVPVV
RKKHRVPALEGAQLKLGFPEGILRRIASHGVDLVPANAQHWRISTGYLLSRLLDALGSLPGHRLDSLSIL
DRVNLESWQGGSQNHGLTFDHLKTVLLWASTLFPAPEDWADLQGSVYRQLVVLLCCLATRKLPHFLYPEH
NLLQDGGLDLGAIYQRVEHFASQPEESLRIHVTHLGPSRPPRIDNGVKALLQLPASDPTYWATAYFDFLL
DKFQVFNIQDKDRISAMQNIFQKTKTMGSENS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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