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Report for CCDS14970.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14970.1 Public Mus musculus 1 Aox4 23 108 98 CCDS HistoryNCBI Gene:71872Re-query CCDS DB by CCDS ID:14970.1Re-query CCDS DB by GeneID:71872See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14970.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040442.5 ENSMUSP00000048929.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040442.5Link to Ensembl Protein Viewer:ENSMUSP00000048929.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000040442Re-query CCDS DB by Protein ID:ENSMUSP00000048929
Original member Current member NCBI NM_023631.2 NP_076120.2 Accepted alive Link to Nucleotide Sequence:NM_023631.2Link to Protein Sequence:NP_076120.2Re-query CCDS DB by Nucleotide ID:NM_023631Re-query CCDS DB by Protein ID:NP_076120Link to BLAST:NP_076120.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076120.2 1336 Q3TYQ9 1336 100% 0 0

Chromosomal Locations for CCDS 14970.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 58210575 58210628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58213022 58213079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58217433 58217529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58219987 58220095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58221828 58221954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58224166 58224227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58228072 58228155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58228854 58228934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58231105 58231249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58231481 58231573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58233838 58233989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58235119 58235212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58236667 58236779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58239117 58239301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58240681 58240843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58245060 58245152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58245801 58245970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58246239 58246353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58247206 58247328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58248848 58248944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58250135 58250259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58252065 58252198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58253526 58253613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58253909 58253995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58254140 58254331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58255475 58255702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58257215 58257310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58259042 58259170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58262565 58262639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58263343 58263395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58263834 58263948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58264342 58264407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58264959 58265144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58266628 58266795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58267760 58267813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4011 nt):
ATGCCTTCCGTCTCCGAGTCTGACGAGCTGATTTTTTTTGTGAATGGAAAAAAGGTCATAGAGAAGAACC
CTGACCCTGAAAAGAATCTACTGTTCTACACCAGGAAAGTTCTCAATCTCACAGGCACTAAGTACAGCTG
TGGAACAGGAGGCTGTGGGGCCTGCACTGTGATGGTGTCGAGATATAATCCAAAGACCAGGAAGATCCAC
CACTACCCAGCAACAGCATGCCTGGTGCCCATCTGCTGGCTTCATGGAGCAGCCATTACCACAGTGGAAG
GTGTGGGGAGCATCAAAAAGAGGGTGCACCCAGTGCAGGAACGACTTGCCAAGTGTCACGGCACCCAGTG
TGGCTTCTGCAGCCCTGGGATGGTGATGTCCATCTACACACTGCTCAGGAACCACCCGGAGCCGACACCT
GATCAGATCACGGAGGCTCTTGGAGGGAATTTGTGCCGATGCACTGGATATCGACCAATTGTAGAAAGCG
GGAAAACATTCTCCCAGAAGTCTACTGTTTGCCAAATGAAGGGATCTGGGAAATGCTGCATGGATCCAGA
TGAGAAGTGTTTGGAGAGCAGAGAGAAAAAGATGTGTACTAAACTGTATAATGAAGATGAGTTCCAGCCG
TTTGACCCATCCCAGGAACCTATATTTCCTCCTGAACTGATTAGAATGGCAGAAGATCCAAACAAGAGGA
GGCTGACATTCCAAGGGAAGAGGACCACCTGGATCATCCCTGTGACACTGAATGACCTCCTGGAACTGAA
AGCCAGCTACCCCGAAGCCCCACTCGTCATGGGGAACACCACAGTGGGACCCGGTATTAAATTTAATGAT
GAATTCTATCCAGTTTTTATATCCCCACTTGGGGTTCCAGAACTAAATCTTATGGACACCACAAACAATG
GGGTAACAATAGGAGCAGGATACAGCCTGGCACAGCTTAAAGATACCTTGGATTTTCTGGTATCAGAACA
ACCAAAGGAGAAGACCAAAACCTTTCACGCCCTCCAGAAACATCTGAGGACACTTGCAGGGCCCCAGATT
AGGAATATGGCTACTTTAGGAGGACACACTGCAAGCCGTCCTAATTTTTCTGACCTCAACCCTATTTTGG
CAGCTGGAAATGCTACCATCAACGTGGTATCTAGAGAAGGAAAAGATCGTCAGCTCCCTTTAAATGGCCC
TTTCCTGGAGAAGTTGCCTGAGGCTGACTTGAAACCAGAAGAGGTTATCTTGTCCATTTTCATTCCTTAC
ACTGCTCAGTGGCAGTTTGTGTCAGGACTCCGGTTGGCACAGCGTCAGGAAAATGCCTTTGCTATTGTCA
ATGCTGGTATGAGCGTGGAGTTTGAGGAAGGTACAAACACGATCAAGGATCTTAAGATGTTCTTTGGAAG
TGTTGCCCCCACTGTGGTCTCTGCAAGTCAAACCTGCAAGCAGCTCATTGGGAGGCAATGGGACGACCAA
ATGCTGAGTGACGCATGCCAGCTGGTCCTGCAGGAGATCCGCATCCCACCAGATGCTGAGGGAGGCATGG
TGGAGTACCGACGCACCCTCATCATCAGCTTGCTCTTCAAATTCTACCTCAAAGTGCAGCGATGGCTGAA
TGAAATGGATCCTCAGAAGTTTCCTGACATCCCAGGAAAGTTTGTGAGTGCCCTAGATGACTTCCCCATA
GAAACACCCCAAGGAATCCAGATGTTCCAGTGTGTGGATCCCAAACAACCCCAGAAAGATCCAGTTGGGC
ACCCAATCATGCACCAGTCGGGTATTAAACATGCCACAGGGGAAGCTATATTTATTGATGACATGCCTCC
CATTGACCAAGAACTCTGCCTTGCCGTTGTCACGAGTACCAGGGCCCATGCAAAGATCACATCACTTGAT
GTATCAGAAGCCCTGGCGTGTCCAGGTGTGGTTGACGTGATCACAGCTGAGGATGTCCCGGGAGAAAATG
ATCACAATGGAGAGATTCTTTATGCACAGAGTGAGGTCATTTGCGTGGGTCAGATCATCTGCACCGTGGC
TGCTGATACCTACATCCATGCAAAAGAAGCAGCTAAACGAGTGAAGATTGCTTATGATGACATAGAGCCA
ACCATTATCACCATAGAGGAAGCCCTAGAACACAATTCTTTCCTTTCTCCTGAGAAAAAAATTGAACAAG
GAAATGTAGACTATGCCTTCAAACATGTGGATCAAATCGTTGAAGGTGAGATCCACGTGGAAGGGCAGGA
ACACTTTTACATGGAAACGCAAACCATCCTGGCTATCCCACAAACTGAAGACAAAGAAATGGTGTTACAC
TTGGGGACACAGTTTCCAACCCACGTGCAGGAATTTGTGTCTGCAGCATTAAATGTCCCAAGGAGCAGGA
TCGCCTGCCACATGAAAAGAGCTGGAGGAGCATTTGGGGGCAAAGTGACCAAGCCTGCTCTACTGGGAGC
TGTCTGTGCTGTGGCTGCCAACAAGACTGGCCGCCCAATCCGCTTCATCCTAGAACGAAGTGATGACATG
CTGATAACAGCTGGCCGCCACCCACTCCTGGGAAAATACAAAATTGGGTTCATGAATAATGGAGAGATCA
GAGCTGCTGACGTTGAATATTACACTAATGGAGGATGCACCCCCGACGAATCTGAGCTGGTGATAGAATT
TGTCGTGCTGAAATCTGAAAATACATATCATATTCCGAATTTCCGGTGCCGGGGCAGGGCTTGCAAAACA
AACTTACCATCTAACACGGCTTTCCGAGGATTTGGCTTCCCTCAGGCTACGGTGGTCGTCGAAGCATACA
TCGCTGCGGTAGCATCTAAATGTAACTTACTCCCTGAAGAGGTTAGAGAAATAAACATGTATAAGAAAAC
TAGCAAGACAGCCTATAAGCAGACGTTTAATCCAGAGCCCTTGCGGAGATGCTGGAAGGAGTGTCTGGAG
AAGTCGTCATTCTTTGCTAGGAAGAAGGCTGCAGAGGAATTTAACGGAAACAACTATTGGAAGAAGAGGG
GGCTTGCTGTCGTCCCCATGAAGTTCAGCGTTGCGGTCCCCATAGCCTTCTACAATCAGGCTGCTGCTCT
GGTCCACATCTTCTTAGACGGCTCTGTCCTGCTGACCCACGGTGGCTGCGAGCTGGGACAAGGCCTACAC
ACTAAGATGATTCAGGTAGCCAGTAGAGAACTCAACGTCCCCAAGTCGTACGTGCACTTTTCTGAAACCA
GCACTACCACAGTGCCCAACTCCGCCTTCACTGCGGGTTCCATGGGAGCAGATATCAATGGGAAGGCTGT
ACAGAATGCCTGCCAGATTCTTATGGACCGTCTTCGGCCCATCATCAGGAAAAACCCTAAAGGAAAATGG
GAGGAATGGATTAAAATGGCCTTTGAAGAATCCATCAGCCTCTCAGCCACTGGATATTTCAAAGGCTACC
AGACAAACATGGACTGGAAGAAGGAGGAAGGTGATCCCTACCCATACTATGTCTATGGCGCAGCCTGCTC
TGAGGTTGAAGTGGACTGTCTGACTGGGGCTCACAAGCTCCTGAGGACCGACATCTTCGTGGATGCTGCC
TTCAGCATTAACCCTGCCCTGGATATCGGGCAGGTTGAGGGAGCCTTTATCCAAGGCATGGGATTCTACA
CCACAGAGGAGTTGAAATACTCCCCAAAAGGTGTGCTCTATTCTCGGGGCCCAGAAGACTACAAAATCCC
CACCATCACTGAGATACCAGAGGAGTTCTATGTCACTCTGGTGCATTCTCGAAATCCCATAGCCATCTAC
TCATCCAAGGGATTGGGTGAGGCTGGGATGTTCCTGGGGTCCTCAGTTTTATTTGCCATATATGATGCCG
TGACCACTGCCCGCAAGGAGAGAGGGCTGAGCGACATCTTCCCCTTGAATAGCCCAGCAACACCTGAAGT
GATTCGCATGGCTTGTACGGATCAGTTTACTGAGATGATTCCCAGAGATGACCCTTCAACATTCACACCT
TGGTCCATCCACGTGTCTTAA

Translation (1336 aa):
MPSVSESDELIFFVNGKKVIEKNPDPEKNLLFYTRKVLNLTGTKYSCGTGGCGACTVMVSRYNPKTRKIH
HYPATACLVPICWLHGAAITTVEGVGSIKKRVHPVQERLAKCHGTQCGFCSPGMVMSIYTLLRNHPEPTP
DQITEALGGNLCRCTGYRPIVESGKTFSQKSTVCQMKGSGKCCMDPDEKCLESREKKMCTKLYNEDEFQP
FDPSQEPIFPPELIRMAEDPNKRRLTFQGKRTTWIIPVTLNDLLELKASYPEAPLVMGNTTVGPGIKFND
EFYPVFISPLGVPELNLMDTTNNGVTIGAGYSLAQLKDTLDFLVSEQPKEKTKTFHALQKHLRTLAGPQI
RNMATLGGHTASRPNFSDLNPILAAGNATINVVSREGKDRQLPLNGPFLEKLPEADLKPEEVILSIFIPY
TAQWQFVSGLRLAQRQENAFAIVNAGMSVEFEEGTNTIKDLKMFFGSVAPTVVSASQTCKQLIGRQWDDQ
MLSDACQLVLQEIRIPPDAEGGMVEYRRTLIISLLFKFYLKVQRWLNEMDPQKFPDIPGKFVSALDDFPI
ETPQGIQMFQCVDPKQPQKDPVGHPIMHQSGIKHATGEAIFIDDMPPIDQELCLAVVTSTRAHAKITSLD
VSEALACPGVVDVITAEDVPGENDHNGEILYAQSEVICVGQIICTVAADTYIHAKEAAKRVKIAYDDIEP
TIITIEEALEHNSFLSPEKKIEQGNVDYAFKHVDQIVEGEIHVEGQEHFYMETQTILAIPQTEDKEMVLH
LGTQFPTHVQEFVSAALNVPRSRIACHMKRAGGAFGGKVTKPALLGAVCAVAANKTGRPIRFILERSDDM
LITAGRHPLLGKYKIGFMNNGEIRAADVEYYTNGGCTPDESELVIEFVVLKSENTYHIPNFRCRGRACKT
NLPSNTAFRGFGFPQATVVVEAYIAAVASKCNLLPEEVREINMYKKTSKTAYKQTFNPEPLRRCWKECLE
KSSFFARKKAAEEFNGNNYWKKRGLAVVPMKFSVAVPIAFYNQAAALVHIFLDGSVLLTHGGCELGQGLH
TKMIQVASRELNVPKSYVHFSETSTTTVPNSAFTAGSMGADINGKAVQNACQILMDRLRPIIRKNPKGKW
EEWIKMAFEESISLSATGYFKGYQTNMDWKKEEGDPYPYYVYGAACSEVEVDCLTGAHKLLRTDIFVDAA
FSINPALDIGQVEGAFIQGMGFYTTEELKYSPKGVLYSRGPEDYKIPTITEIPEEFYVTLVHSRNPIAIY
SSKGLGEAGMFLGSSVLFAIYDAVTTARKERGLSDIFPLNSPATPEVIRMACTDQFTEMIPRDDPSTFTP
WSIHVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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