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Report for CCDS14814.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14814.1 Public Mus musculus 1 Vcpip1 23 108 98 CCDS HistoryNCBI Gene:70675Re-query CCDS DB by CCDS ID:14814.1Re-query CCDS DB by GeneID:70675See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14814.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057438.6 ENSMUSP00000051248.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057438.6Link to Ensembl Protein Viewer:ENSMUSP00000051248.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000057438Re-query CCDS DB by Protein ID:ENSMUSP00000051248
Original member Current member NCBI NM_173443.3 NP_775619.2 Accepted alive Link to Nucleotide Sequence:NM_173443.3Link to Protein Sequence:NP_775619.2Re-query CCDS DB by Nucleotide ID:NM_173443Re-query CCDS DB by Protein ID:NP_775619Link to BLAST:NP_775619.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775619.2 1220 Q8CDG3-1 1220 99.918% 0 1

Chromosomal Locations for CCDS 14814.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 9724482 9725350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 9736966 9737052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 9745450 9748156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3663 nt):
ATGTCTCAGCCGCCGCCGCCTCCTCCGCTGCCGCCGCCGCCGCCTCCCCCTGAGGCTCCGCAGACTTCGT
CGTCTCTGGCGGCGGCGGCTTCTCCGGGGGGCCTTTCGAAACGAAGGGACCGAAGAATCCTTTCCGGGAG
TTGCCCGGATCCCAAGTGCCAGGCGCGCCTCTTCTTCCCGGCCTCGGGTTCTGTCAGCATCGAGTGTACC
GAGTGCGGACAGCGGCACGAGCAGCAACAGCTGCTGGGAGTGGAGGAGGTGACCGACCCGGACGTAGTGC
TGCACAATCTGCTGCGGAACGCGCTACTCGGAGTGACGGGGGCTCCCAAGAAGAACACGGAACTGGTAAA
GGTGATGGGCCTCTCCAACTACCACTGCAAATTATTGTCGCCAATATTGGCACGCTATGGAATGGACAAA
CAAACGGGCCGGGCCAAGCTTCTCCGGGACATGAACCAAGGCGAACTGTTCGATTGCGCGTTACTTGGTG
ACCGGGCCTTCCTCATCGAACCAGAGCACGTCAACACAGTGGGCTATGGCAAGGACCGCTCCGGAAGCCT
CCTGTATTTGCACGACACGCTCGAGGATATCAAACGGGCTAATAAAAGTCAAGAATGCCTCATCCCAGTG
CATGTGGATGGGGATGGACACTGCCTAGTGCATGCTGTGTCTAGGGCTCTAGTAGGCCGAGAGCTCTTCT
GGCATGCTCTGAGGGAGAATCTTAAGCAGCACTTTCAGCAGCACCTAGCCCGATATCAAGCCCTGTTTCA
TGACTTTATTGATGCTGCCGAGTGGGAGGACATTATCAATGAATGTGACCCTCTGTTTGTGCCACCTGAA
GGTGTCCCCTTAGGCCTGAGGAATATCCACATATTCGGCCTTGCCAATGTGTTACATCGTCCCATAATTC
TTTTAGATTCCCTCAGCGGCATGAGAAGCTCTGGTGATTATTCAGCCACCTTTCTACCTGGCCTCATACC
TGCAGAGAAATGCACTGGGAGAGATGGTCATTTGAACAAGCCAATCTGTATTGCGTGGAGTAGCTCTGGT
AGAAACCATTATATTCCCTTGGTAGGCATAAAGGGGGCTGCCCTGCCCAAACTACCCATGAATTTGTTAC
CTAAAGCATGGGGTGTGCCTCAGGACCTTATTAAAAAGTACATCAAGCTTGAGGAGGATGGTGGCTGTGT
TATTGGAGGAGACAGAAGTTTGCAGGATAAGTACTTACTTAGGCTGGTTGCTGCTATGGAAGAAGTCTTT
ATGGACAAACATGGTATCCATCCTAGTTTGGTTGCTGATGTACATCAGTATTTCTACAGAAGGACTGGGG
TGATAGGAGTTCAGCCTGAGGAAGTTACAGCAGCTGCTAAAAAGGCAGTAATGGACAATCGCCTTCACAA
GTGTTTGCTTTGTGGTGCCCTTTCTGAACTTCATGTCCCTTCTGAGTGGTTGGCTCCAGGAGGGAAACTG
TATAACTTGGCAAAAAGTACTCATGGGCAGTTGAGGCCTGACAAAAATTACAGCTTTCCCTTAAACAATT
TGGTTTGTTCATATGATCCAGTAAAAGATGTTCTGCTACCAGACTATGGATTGAGTAATCTAACAGCTTG
TAATTGGTGCCATGGCTCATCTGTGCGAAGAGTCAGAGGAGATGGCTCTATTGTGTATTTGGATGGAGAC
AGAACTAATTCTAGGTCTACTGGTGGCAAATGTGGTTGTGGATTCAAACATTTTTGGGAAGGTAAAGAGT
ATGACAATCTTCCAGAAGCTTTTCCTATCACTTTGGAGTGGGGAGGAAGAGTAGTCAGAGAAACAGTATA
TTGGTTTCAGTATGAAAGCGATCCATCTTTGAATAGTAATGTTTATGATGTTGCAATGAAACTTGTTACC
AAGCACTTTCCAGGTGAATTTGGGAGTGAGATCCTAGTTCAGAAAGTTGTCCACACTATATTGCATCAGA
CTGCAAAAAAAAATCCGGACGATTACACTCCTGTAAATATAGATGGTGCTCATGCTCAGAGAGTTGGAGA
TGTGCAAGGACAAGAATTGGAGTCGCAGCTACCAACTAAAATTATTCTTACTGGACAGAAAACAAAAACT
TTGCATAAGGAAGAATTAAACATGAGTAAAACTGAAAGAACTATTCAACAGAACATCACAGAACAAGCTT
CTGTGATGCAGAAACGGAAAACAGAGAAATTAAAACAAGAGCAAAAGGGGCAGCCCAGAACTGTTTCTCC
AAGTACTATTCGTGATGGGCCATCATCTGCACCTGCCACCCCCACCAAGGCTCCCTACTCACCTACCACT
TCTAAGGAGAAGAAGATTCGAATAACAACTAACGATGGACGGCAGTCTATGGTTACCCTTAAGCCTTCAA
CAACCTTTTTTGAGCTTCAGGAAAGTATAGCCAGAGAGTTCAACATTCCTCCATATTTACAGTGTATTCG
ATATGGCTTTCCTCCTAAAGAGTTAATGCCACCCCAGGCAGGGATGGAAAAGGAGCCAGTTCCTTTACAG
CACGGTGACAGAATTACAATAGAGATCTTAAAAGGAAGAGCAGAAGGTGGTCCATCCACTGCTGCACACT
CAGCCCACACTGTGAAACAAGAAGAGATTGCTGTTACTGGTAAACTGTCATCTAAGGAACTTCAGGAGCA
AGCTGACAAAGAAATGTACTCCTTGTGTCTTTTAGCTACATTAATGGGAGAAGACGTGTGGTCTTATGCA
AAGGGACTTCCTCACATGTTCCAGCAGGGTGGTGTATTCTACAATATTATGAAGAAAACTATGGGCATGG
CTGATGGCAAACATTGTACTTTTCCACATCTACCTGGCAAAACCTTTGTTTATAATGCTTCTGAAGATAG
ACTGGAGTTGTGTGTCGATGCTGCAGGACATTTCCCCATTGGTCCTGATGTTGAAGATTTAGTTAAAGAG
GCTGTAAGTCAGGTGCGAGCAGAGGCTACTACAAGAAGTAGGGAATCAAGCCCTTCACATGGGTTATTAA
AACTAGGTAGTGGTGGAGTAGTGAAAAAGAAATCTGAGCAACTTCACAATGTAACTGCCTTTCAGGGGAA
GGGCCATTCTCTAGGAACTGCATCTAGTCACCCGCACATTGATCCCAGAGCTAGGGAAACTCTGGCTGTG
AGAAAGCATAATACAGGGACAGATTTTAGTAATAGTTCCATTAAAACAGAGCCTCCCGTGTTCACAGCTG
CTTCTAGTAATAGTGAGCTTATTCGAATAGCTCCTGGAGTAGTAACAATGAGAGACGGTAGGCAGATTGA
TCCTGATGTGGTTGAGGCCCAGCGGAAAAAATTGCAGGAAATGGTTTCTTCTATTCAGGCTTCAATGGAC
AAGCACTTGCGGGATCAAAGTGCAGAGCAAGCACCATCTGATCTTTCCCAAAGAAAAGTCGAAGTTGTGA
GTTCTGTGAGGCCTGTGAATCTTCAGACTGGCTTGCCTGAACCGTTTTCTTTAACTGGTGGCACTGAGAA
TTTGAATACTGAAACAACTGATAGTCATGTAGCAGATGTACTGGGAGCAGCATTTGCCACAAGGTCAAAA
GCACAAAAAGAAAATTCCATGGAGGAACCTGAAGAGATGGATAGTCAAGATGCTGAGACGACTAACACAA
CTGAGCCGATGGATCACTCGTGA

Translation (1220 aa):
MSQPPPPPPLPPPPPPPEAPQTSSSLAAAASPGGLSKRRDRRILSGSCPDPKCQARLFFPASGSVSIECT
ECGQRHEQQQLLGVEEVTDPDVVLHNLLRNALLGVTGAPKKNTELVKVMGLSNYHCKLLSPILARYGMDK
QTGRAKLLRDMNQGELFDCALLGDRAFLIEPEHVNTVGYGKDRSGSLLYLHDTLEDIKRANKSQECLIPV
HVDGDGHCLVHAVSRALVGRELFWHALRENLKQHFQQHLARYQALFHDFIDAAEWEDIINECDPLFVPPE
GVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLIPAEKCTGRDGHLNKPICIAWSSSG
RNHYIPLVGIKGAALPKLPMNLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLLRLVAAMEEVF
MDKHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHKCLLCGALSELHVPSEWLAPGGKL
YNLAKSTHGQLRPDKNYSFPLNNLVCSYDPVKDVLLPDYGLSNLTACNWCHGSSVRRVRGDGSIVYLDGD
RTNSRSTGGKCGCGFKHFWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYESDPSLNSNVYDVAMKLVT
KHFPGEFGSEILVQKVVHTILHQTAKKNPDDYTPVNIDGAHAQRVGDVQGQELESQLPTKIILTGQKTKT
LHKEELNMSKTERTIQQNITEQASVMQKRKTEKLKQEQKGQPRTVSPSTIRDGPSSAPATPTKAPYSPTT
SKEKKIRITTNDGRQSMVTLKPSTTFFELQESIAREFNIPPYLQCIRYGFPPKELMPPQAGMEKEPVPLQ
HGDRITIEILKGRAEGGPSTAAHSAHTVKQEEIAVTGKLSSKELQEQADKEMYSLCLLATLMGEDVWSYA
KGLPHMFQQGGVFYNIMKKTMGMADGKHCTFPHLPGKTFVYNASEDRLELCVDAAGHFPIGPDVEDLVKE
AVSQVRAEATTRSRESSPSHGLLKLGSGGVVKKKSEQLHNVTAFQGKGHSLGTASSHPHIDPRARETLAV
RKHNTGTDFSNSSIKTEPPVFTAASSNSELIRIAPGVVTMRDGRQIDPDVVEAQRKKLQEMVSSIQASMD
KHLRDQSAEQAPSDLSQRKVEVVSSVRPVNLQTGLPEPFSLTGGTENLNTETTDSHVADVLGAAFATRSK
AQKENSMEEPEEMDSQDAETTNTTEPMDHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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