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Report for CCDS14683.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14683.1 Public Homo sapiens X FMR1NB 24 110 108 CCDS HistoryNCBI Gene:158521Re-query CCDS DB by CCDS ID:14683.1Re-query CCDS DB by GeneID:158521See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14683.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370467.8 ENSP00000359498.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370467.8Link to Ensembl Protein Viewer:ENSP00000359498.3Re-query CCDS DB by Nucleotide ID:ENST00000370467Re-query CCDS DB by Protein ID:ENSP00000359498
Original member Current member NCBI NM_152578.3 NP_689791.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152578.3Link to Protein Sequence:NP_689791.1Re-query CCDS DB by Nucleotide ID:NM_152578Re-query CCDS DB by Protein ID:NP_689791Link to BLAST:NP_689791.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689791.1 255 Q8N0W7 255 100% 0 0

Chromosomal Locations for CCDS 14683.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 147981403 147981679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 148003201 148003320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 148006702 148006842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 148008618 148008711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 148024865 148025000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (768 nt):
ATGTCTTCACATAGGAGGAAAGCGAAGGGGAGGAATAGGAGAAGTCACCGTGCCATGCGTGTGGCTCACT
TAGAGCTGGCAACTTATGAGTTGGCGGCAACTGAGTCGAATCCCGAGAGCAGCCATCCTGGATACGAGGC
CGCCATGGCTGACAGGCCTCAGCCAGGATGGCGGGAATCTCTAAAGATGCGGGTCAGCAAACCCTTTGGG
ATGCTCATGCTCTCCATTTGGATCCTGCTGTTCGTGTGCTACTACCTGTCCTACTACCTGTGCTCCGGGT
CCTCATATTTTGTGCTTGCAAATGGACATATCCTGCCCAACAGTGAAAATGCTCATGGCCAATCTCTGGA
AGAAGATTCCGCATTGGAAGCTTTGCTGAATTTTTTCTTTCCAACAACTTGCAATCTGAGGGAAAATCAG
GTGGCAAAGCCTTGTAATGAGCTGCAAGATCTTAGTGAGAGTGAATGTTTGAGACACAAATGCTGTTTTT
CATCATCGGGGACCACGAGCTTCAAATGTTTTGCTCCATTTAGAGATGTGCCTAAACAGATGATGCAAAT
GTTTGGGCTTGGTGCGATCAGCCTTATCCTGGTATGTCTGCCCATTTATTGCCGCTCTCTTTTCTGGAGG
AGCGAACCGGCCGATGATTTACAAAGGCAGGACAACAGAGTTGTAACGGGTTTGAAGAAACAAAGAAGGA
AGCGAAAGAGGAAGTCTGAAATGTTACAGAAAGCAGCAAGAGGACGTGAGGAACATGGTGACGAGTAG

Translation (255 aa):
MSSHRRKAKGRNRRSHRAMRVAHLELATYELAATESNPESSHPGYEAAMADRPQPGWRESLKMRVSKPFG
MLMLSIWILLFVCYYLSYYLCSGSSYFVLANGHILPNSENAHGQSLEEDSALEALLNFFFPTTCNLRENQ
VAKPCNELQDLSESECLRHKCCFSSSGTTSFKCFAPFRDVPKQMMQMFGLGAISLILVCLPIYCRSLFWR
SEPADDLQRQDNRVVTGLKKQRRKRKRKSEMLQKAARGREEHGDE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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