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Report for CCDS14330.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14330.1 Public Homo sapiens X AKAP4 24 110 108 CCDS HistoryNCBI Gene:8852Re-query CCDS DB by CCDS ID:14330.1Re-query CCDS DB by GeneID:8852See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14330.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376064.7 ENSP00000365232.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376064.7Link to Ensembl Protein Viewer:ENSP00000365232.3Re-query CCDS DB by Nucleotide ID:ENST00000376064Re-query CCDS DB by Protein ID:ENSP00000365232
Original member Current member NCBI NM_139289.2 NP_647450.1 Accepted alive Link to Nucleotide Sequence:NM_139289.2Link to Protein Sequence:NP_647450.1Re-query CCDS DB by Nucleotide ID:NM_139289Re-query CCDS DB by Protein ID:NP_647450Link to BLAST:NP_647450.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_647450.1 845 Q5JQC9-2 845 100% 0 0

Chromosomal Locations for CCDS 14330.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 50190960 50191115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 50192304 50194436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 50196891 50196992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 50197544 50197594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 50198657 50198752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2538 nt):
ATGTCTGATGATATTGACTGGTTACGCAGCCACAGGGGTGTGTGCAAGGTAGATCTCTACAACCCAGAAG
GACAGCAAGATCAGGACCGGAAAGTGATATGCTTTGTCGATGTGTCCACCCTGAATGTAGAAGATAAAGA
TTACAAGGATGCTGCTAGTTCCAGCTCAGAAGGCAACTTAAACCTGGGAAGTCTGGAAGAAAAAGAGATT
ATCGTGATCAAGGACACTGAGAAGAAAGACCAGTCTAAGACAGAGGGATCTGTATGCCTTTTCAAACAAG
CTCCCTCTGATCCTGTAAGTGTCCTCAACTGGCTTCTCAGTGATCTCCAGAAGTATGCCTTGGGTTTCCA
ACATGCACTGAGCCCCTCAACCTCTACCTGTAAACATAAAGTAGGAGACACAGAGGGCGAATATCACAGA
GCATCCTCTGAGAACTGCTACAGTGTCTATGCCGATCAAGTGAACATAGATTATTTGATGAACAGACCTC
AAAACCTACGTCTAGAAATGACAGCAGCTAAAAACACCAACAATAATCAAAGTCCTTCAGCTCCTCCAGC
CAAACCTCCTAGCACTCAGAGAGCAGTCATTTCCCCTGATGGAGAATGTTCTATAGATGACCTTTCCTTC
TACGTCAACCGACTATCTTCTCTGGTAATCCAGATGGCCCATAAGGAAATCAAGGAGAAGTTGGAAGGTA
AAAGCAAATGCCTTCATCATTCAATCTGTCCATCCCCTGGGAACAAAGAGAGAATCAGTCCCCGAACTCC
TGCGAGCAAGATTGCTTCTGAAATGGCCTATGAAGCTGTGGAACTGACAGCTGCAGAAATGCGTGGCACT
GGAGAGGAGTCCAGGGAAGGTGGCCAGAAAAGCTTTCTATATAGCGAATTATCCAACAAGAGCAAAAGTG
GAGACAAACAGATGTCCCAGAGAGAGAGCAAAGAATTTGCAGATTCCATCAGCAAGGGGCTCATGGTTTA
TGCAAATCAGGTGGCATCTGACATGATGGTCTCTCTCATGAAGACCTTGAAAGTGCACAGCTCTGGGAAG
CCAATTCCAGCATCTGTGGTCCTGAAGAGGGTGTTGCTAAGGCACACCAAGGAGATTGTGTCCGATTTGA
TTGATTCTTGCATGAAGAACCTGCATAATATTACTGGGGTCCTGATGACTGACTCAGACTTTGTCTCAGC
TGTCAAGAGAAATCTGTTCAACCAGTGGAAACAAAATGCTACAGACATCATGGAGGCCATGCTGAAGCGC
TTGGTCAGTGCCCTTATAGGTGAGGAGAAGGAGACTAAGTCTCAGAGTCTGTCATATGCATCTTTAAAAG
CTGGGTCCCATGATCCCAAATGCAGGAATCAGAGTCTTGAATTCTCCACCATGAAAGCTGAAATGAAAGA
GAGGGACAAAGGCAAAATGAAATCAGACCCATGCAAGTCACTGACTAGTGCTGAGAAAGTCGGTGAACAC
ATTCTCAAAGAGGGCCTAACCATCTGGAACCAAAAGCAAGGAAACTCATGCAAGGTGGCTACCAAAGCAT
GCAGCAATAAAGATGAGAAAGGAGAAAAGATCAATGCTTCCACAGATTCACTGGCCAAGGACCTGATTGT
CTCTGCCCTTAAGCTGATCCAGTACCATCTGACCCAGCAGACTAAGGGCAAAGATACATGTGAAGAAGAC
TGTCCTGGTTCCACCATGGGCTATATGGCTCAGAGTACTCAATATGAAAAGTGTGGAGGTGGCCAAAGTG
CCAAAGCACTTTCAGTGAAACAACTAGAATCTCACAGAGCCCCTGGACCATCCACCTGTCAAAAGGAGAA
CCAACACCTGGACTCCCAGAAAATGGATATGTCAAACATCGTTCTAATGCTGATTCAGAAACTGCTTAAT
GAGAACCCCTTCAAATGTGAGGATCCATGCGAAGGTGAGAACAAGTGTTCTGAGCCCAGGGCAAGCAAAG
CAGCTTCCATGTCCAACAGATCTGACAAAGCGGAAGAACAATGCCAGGAGCATCAAGAACTTGACTGTAC
CAGTGGGATGAAGCAAGCGAACGGGCAATTTATAGATAAACTAGTAGAATCTGTGATGAAGCTCTGCCTT
ATCATGGCTAAGTATAGCAACGATGGGGCAGCCCTTGCTGAGTTGGAAGAACAAGCAGCCTCGGCAAATA
AGCCCAATTTCAGGGGCACCAGATGCATTCACAGTGGTGCAATGCCACAGAACTATCAAGACTCTCTTGG
ACATGAAGTAATTGTCAATAATCAGTGCTCTACAAATAGCTTGCAGAAGCAGCTCCAGGCTGTCCTGCAG
TGGATTGCAGCCTCCCAGTTTAACGTGCCCATGCTCTACTTCATGGGAGATAAGGATGGACAACTGGAAA
AGCTTCCTCAGGTTTCAGCTAAAGCAGCAGAGAAGGGGTACAGTGTAGGAGGTCTTCTTCAAGAGGTCAT
GAAGTTTGCCAAGGAACGGCAACCAGATGAAGCTGTGGGAAAGGTGGCCAGGAAACAGTTGCTGGACTGG
CTGCTCGCTAACCTGTGA

Translation (845 aa):
MSDDIDWLRSHRGVCKVDLYNPEGQQDQDRKVICFVDVSTLNVEDKDYKDAASSSSEGNLNLGSLEEKEI
IVIKDTEKKDQSKTEGSVCLFKQAPSDPVSVLNWLLSDLQKYALGFQHALSPSTSTCKHKVGDTEGEYHR
ASSENCYSVYADQVNIDYLMNRPQNLRLEMTAAKNTNNNQSPSAPPAKPPSTQRAVISPDGECSIDDLSF
YVNRLSSLVIQMAHKEIKEKLEGKSKCLHHSICPSPGNKERISPRTPASKIASEMAYEAVELTAAEMRGT
GEESREGGQKSFLYSELSNKSKSGDKQMSQRESKEFADSISKGLMVYANQVASDMMVSLMKTLKVHSSGK
PIPASVVLKRVLLRHTKEIVSDLIDSCMKNLHNITGVLMTDSDFVSAVKRNLFNQWKQNATDIMEAMLKR
LVSALIGEEKETKSQSLSYASLKAGSHDPKCRNQSLEFSTMKAEMKERDKGKMKSDPCKSLTSAEKVGEH
ILKEGLTIWNQKQGNSCKVATKACSNKDEKGEKINASTDSLAKDLIVSALKLIQYHLTQQTKGKDTCEED
CPGSTMGYMAQSTQYEKCGGGQSAKALSVKQLESHRAPGPSTCQKENQHLDSQKMDMSNIVLMLIQKLLN
ENPFKCEDPCEGENKCSEPRASKAASMSNRSDKAEEQCQEHQELDCTSGMKQANGQFIDKLVESVMKLCL
IMAKYSNDGAALAELEEQAASANKPNFRGTRCIHSGAMPQNYQDSLGHEVIVNNQCSTNSLQKQLQAVLQ
WIAASQFNVPMLYFMGDKDGQLEKLPQVSAKAAEKGYSVGGLLQEVMKFAKERQPDEAVGKVARKQLLDW
LLANL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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