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Report for CCDS14329.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14329.1 Public Homo sapiens X AKAP4 24 110 108 CCDS HistoryNCBI Gene:8852Re-query CCDS DB by CCDS ID:14329.1Re-query CCDS DB by GeneID:8852See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14329.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358526.7 ENSP00000351327.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358526.7Link to Ensembl Protein Viewer:ENSP00000351327.2Re-query CCDS DB by Nucleotide ID:ENST00000358526Re-query CCDS DB by Protein ID:ENSP00000351327
Original member Current member NCBI NM_003886.3 NP_003877.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003886.3Link to Protein Sequence:NP_003877.2Re-query CCDS DB by Nucleotide ID:NM_003886Re-query CCDS DB by Protein ID:NP_003877Link to BLAST:NP_003877.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003877.2 854 Q5JQC9-1 854 100% 0 0

Chromosomal Locations for CCDS 14329.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 50190960 50191115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 50192304 50194436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 50196891 50196992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 50197544 50197594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 50198657 50198752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 50200863 50200889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2565 nt):
ATGATGGCGTACTCTGATACTACAATGATGTCTGATGATATTGACTGGTTACGCAGCCACAGGGGTGTGT
GCAAGGTAGATCTCTACAACCCAGAAGGACAGCAAGATCAGGACCGGAAAGTGATATGCTTTGTCGATGT
GTCCACCCTGAATGTAGAAGATAAAGATTACAAGGATGCTGCTAGTTCCAGCTCAGAAGGCAACTTAAAC
CTGGGAAGTCTGGAAGAAAAAGAGATTATCGTGATCAAGGACACTGAGAAGAAAGACCAGTCTAAGACAG
AGGGATCTGTATGCCTTTTCAAACAAGCTCCCTCTGATCCTGTAAGTGTCCTCAACTGGCTTCTCAGTGA
TCTCCAGAAGTATGCCTTGGGTTTCCAACATGCACTGAGCCCCTCAACCTCTACCTGTAAACATAAAGTA
GGAGACACAGAGGGCGAATATCACAGAGCATCCTCTGAGAACTGCTACAGTGTCTATGCCGATCAAGTGA
ACATAGATTATTTGATGAACAGACCTCAAAACCTACGTCTAGAAATGACAGCAGCTAAAAACACCAACAA
TAATCAAAGTCCTTCAGCTCCTCCAGCCAAACCTCCTAGCACTCAGAGAGCAGTCATTTCCCCTGATGGA
GAATGTTCTATAGATGACCTTTCCTTCTACGTCAACCGACTATCTTCTCTGGTAATCCAGATGGCCCATA
AGGAAATCAAGGAGAAGTTGGAAGGTAAAAGCAAATGCCTTCATCATTCAATCTGTCCATCCCCTGGGAA
CAAAGAGAGAATCAGTCCCCGAACTCCTGCGAGCAAGATTGCTTCTGAAATGGCCTATGAAGCTGTGGAA
CTGACAGCTGCAGAAATGCGTGGCACTGGAGAGGAGTCCAGGGAAGGTGGCCAGAAAAGCTTTCTATATA
GCGAATTATCCAACAAGAGCAAAAGTGGAGACAAACAGATGTCCCAGAGAGAGAGCAAAGAATTTGCAGA
TTCCATCAGCAAGGGGCTCATGGTTTATGCAAATCAGGTGGCATCTGACATGATGGTCTCTCTCATGAAG
ACCTTGAAAGTGCACAGCTCTGGGAAGCCAATTCCAGCATCTGTGGTCCTGAAGAGGGTGTTGCTAAGGC
ACACCAAGGAGATTGTGTCCGATTTGATTGATTCTTGCATGAAGAACCTGCATAATATTACTGGGGTCCT
GATGACTGACTCAGACTTTGTCTCAGCTGTCAAGAGAAATCTGTTCAACCAGTGGAAACAAAATGCTACA
GACATCATGGAGGCCATGCTGAAGCGCTTGGTCAGTGCCCTTATAGGTGAGGAGAAGGAGACTAAGTCTC
AGAGTCTGTCATATGCATCTTTAAAAGCTGGGTCCCATGATCCCAAATGCAGGAATCAGAGTCTTGAATT
CTCCACCATGAAAGCTGAAATGAAAGAGAGGGACAAAGGCAAAATGAAATCAGACCCATGCAAGTCACTG
ACTAGTGCTGAGAAAGTCGGTGAACACATTCTCAAAGAGGGCCTAACCATCTGGAACCAAAAGCAAGGAA
ACTCATGCAAGGTGGCTACCAAAGCATGCAGCAATAAAGATGAGAAAGGAGAAAAGATCAATGCTTCCAC
AGATTCACTGGCCAAGGACCTGATTGTCTCTGCCCTTAAGCTGATCCAGTACCATCTGACCCAGCAGACT
AAGGGCAAAGATACATGTGAAGAAGACTGTCCTGGTTCCACCATGGGCTATATGGCTCAGAGTACTCAAT
ATGAAAAGTGTGGAGGTGGCCAAAGTGCCAAAGCACTTTCAGTGAAACAACTAGAATCTCACAGAGCCCC
TGGACCATCCACCTGTCAAAAGGAGAACCAACACCTGGACTCCCAGAAAATGGATATGTCAAACATCGTT
CTAATGCTGATTCAGAAACTGCTTAATGAGAACCCCTTCAAATGTGAGGATCCATGCGAAGGTGAGAACA
AGTGTTCTGAGCCCAGGGCAAGCAAAGCAGCTTCCATGTCCAACAGATCTGACAAAGCGGAAGAACAATG
CCAGGAGCATCAAGAACTTGACTGTACCAGTGGGATGAAGCAAGCGAACGGGCAATTTATAGATAAACTA
GTAGAATCTGTGATGAAGCTCTGCCTTATCATGGCTAAGTATAGCAACGATGGGGCAGCCCTTGCTGAGT
TGGAAGAACAAGCAGCCTCGGCAAATAAGCCCAATTTCAGGGGCACCAGATGCATTCACAGTGGTGCAAT
GCCACAGAACTATCAAGACTCTCTTGGACATGAAGTAATTGTCAATAATCAGTGCTCTACAAATAGCTTG
CAGAAGCAGCTCCAGGCTGTCCTGCAGTGGATTGCAGCCTCCCAGTTTAACGTGCCCATGCTCTACTTCA
TGGGAGATAAGGATGGACAACTGGAAAAGCTTCCTCAGGTTTCAGCTAAAGCAGCAGAGAAGGGGTACAG
TGTAGGAGGTCTTCTTCAAGAGGTCATGAAGTTTGCCAAGGAACGGCAACCAGATGAAGCTGTGGGAAAG
GTGGCCAGGAAACAGTTGCTGGACTGGCTGCTCGCTAACCTGTGA

Translation (854 aa):
MMAYSDTTMMSDDIDWLRSHRGVCKVDLYNPEGQQDQDRKVICFVDVSTLNVEDKDYKDAASSSSEGNLN
LGSLEEKEIIVIKDTEKKDQSKTEGSVCLFKQAPSDPVSVLNWLLSDLQKYALGFQHALSPSTSTCKHKV
GDTEGEYHRASSENCYSVYADQVNIDYLMNRPQNLRLEMTAAKNTNNNQSPSAPPAKPPSTQRAVISPDG
ECSIDDLSFYVNRLSSLVIQMAHKEIKEKLEGKSKCLHHSICPSPGNKERISPRTPASKIASEMAYEAVE
LTAAEMRGTGEESREGGQKSFLYSELSNKSKSGDKQMSQRESKEFADSISKGLMVYANQVASDMMVSLMK
TLKVHSSGKPIPASVVLKRVLLRHTKEIVSDLIDSCMKNLHNITGVLMTDSDFVSAVKRNLFNQWKQNAT
DIMEAMLKRLVSALIGEEKETKSQSLSYASLKAGSHDPKCRNQSLEFSTMKAEMKERDKGKMKSDPCKSL
TSAEKVGEHILKEGLTIWNQKQGNSCKVATKACSNKDEKGEKINASTDSLAKDLIVSALKLIQYHLTQQT
KGKDTCEEDCPGSTMGYMAQSTQYEKCGGGQSAKALSVKQLESHRAPGPSTCQKENQHLDSQKMDMSNIV
LMLIQKLLNENPFKCEDPCEGENKCSEPRASKAASMSNRSDKAEEQCQEHQELDCTSGMKQANGQFIDKL
VESVMKLCLIMAKYSNDGAALAELEEQAASANKPNFRGTRCIHSGAMPQNYQDSLGHEVIVNNQCSTNSL
QKQLQAVLQWIAASQFNVPMLYFMGDKDGQLEKLPQVSAKAAEKGYSVGGLLQEVMKFAKERQPDEAVGK
VARKQLLDWLLANL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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