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Report for CCDS14140.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14140.1 Public Homo sapiens X ARHGAP6 24 110 108 CCDS HistoryNCBI Gene:395Re-query CCDS DB by CCDS ID:14140.1Re-query CCDS DB by GeneID:395See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14140.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337414.9 ENSP00000338967.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000337414.9Link to Ensembl Protein Viewer:ENSP00000338967.4Re-query CCDS DB by Nucleotide ID:ENST00000337414Re-query CCDS DB by Protein ID:ENSP00000338967
Original member Current member NCBI NM_013427.3 NP_038286.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013427.3Link to Protein Sequence:NP_038286.2Re-query CCDS DB by Nucleotide ID:NM_013427Re-query CCDS DB by Protein ID:NP_038286Link to BLAST:NP_038286.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038286.2 974 O43182-1 974 100% 0 0

Chromosomal Locations for CCDS 14140.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 11138863 11139530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 11142233 11142313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 11143980 11144248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 11156529 11156626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 11169505 11169684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 11178100 11178248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 11179302 11179452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 11182063 11182118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 11186236 11186431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 11188728 11188984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 11196925 11196996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 11254548 11254707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 11664241 11664828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2925 nt):
ATGTCCGCGCAGAGCCTGCTCCACAGCGTCTTCTCCTGTTCCTCGCCCGCTTCAAGTAGCGCGGCCTCGG
CCAAGGGCTTCTCCAAGAGGAAGCTGCGCCAGACCCGCAGCCTGGACCCGGCCCTGATCGGCGGCTGCGG
GAGCGACGAGGCGGGCGCGGAGGGCAGTGCGCGGGGAGCCACGGCGGGCCGCCTCTACTCCCCATCACTC
CCAGCCGAGAGTCTCGGCCCTCGCTTGGCGTCCTCTTCCCGGGGTCCGCCCCCCAGGGCCACCAGGCTAC
CGCCTCCTGGACCTCTTTGCTCGTCCTTCTCCACACCCAGCACCCCGCAGGAGAAGTCACCATCCGGCAG
CTTTCACTTTGACTATGAGGTTCCCCTGGGTCGCGGCGGCCTCAAGAAGAGCATGGCCTGGGACCTGCCT
TCTGTCCTGGCCGGGCCAGCCAGTAGCCGAAGCGCTTCCAGCATCCTCTGTTCATCCGGGGGAGGCCCCA
ATGGCATCTTCGCTTCTCCTAGGAGGTGGCTCCAGCAGAGGAAGTTCCAGTCCCCACCCGACAGTCGCGG
GCACCCCTACGTCGTGTGGAAATCCGAGGGTGATTTCACCTGGAACAGCATGTCAGGCCGCAGTGTACGG
CTGAGGTCAGTCCCCATCCAGAGTCTCTCAGAGCTGGAGAGGGCCCGGCTGCAGGAAGTGGCTTTTTATC
AGTTGCAACAGGACTGTGACCTGAGCTGTCAGATCACCATTCCCAAAGATGGACAAAAGAGAAAGAAATC
TTTAAGAAAGAAACTGGATTCACTAGGAAAGGAGAAAAACAAAGACAAAGAATTCATCCCACAGGCATTT
GGAATGCCCTTATCCCAAGTCATTGCGAATGACAGGGCCTATAAACTCAAGCAGGACTTGCAGAGGGACG
AGCAGAAAGATGCATCTGACTTTGTGGCTTCCCTCCTCCCATTTGGAAATAAAAGACAAAACAAAGAACT
CTCAAGCAGTAACTCATCTCTCAGCTCAACCTCAGAAACACCGAATGAGTCAACGTCCCCAAACACCCCG
GAACCGGCTCCTCGGGCTAGGAGGAGGGGTGCCATGTCAGTGGATTCTATCACCGATCTTGATGACAATC
AGTCTCGACTACTAGAAGCTTTACAACTTTCCTTGCCTGCTGAGGCTCAAAGTAAAAAGGAAAAAGCCAG
AGATAAGAAACTCAGTCTGAATCCTATTTACAGACAGGTCCCTAGGCTGGTGGACAGCTGCTGTCAGCAC
CTAGAAAAACATGGCCTCCAGACAGTGGGGATATTCCGAGTTGGAAGCTCAAAAAAGAGAGTGAGACAAT
TACGTGAGGAATTTGACCGTGGGATTGATGTCTCTCTGGAGGAGGAGCACAGTGTTCATGATGTGGCAGC
CTTGCTGAAAGAGTTCCTGAGGGACATGCCAGACCCCCTTCTCACCAGGGAGCTGTACACAGCTTTCATC
AACACTCTCTTGTTGGAGCCGGAGGAACAGCTGGGCACCTTGCAGCTCCTCATATACCTTCTACCTCCCT
GCAACTGCGACACCCTCCACCGCCTGCTACAGTTCCTCTCCATCGTGGCCAGGCATGCCGATGACAACAT
CAGCAAAGATGGGCAAGAGGTCACTGGGAATAAAATGACATCTCTAAACTTAGCCACCATATTTGGACCC
AACCTGCTGCACAAGCAGAAGTCATCAGACAAAGAATTCTCAGTTCAGAGTTCAGCCCGGGCTGAGGAGA
GCACGGCCATCATCGCTGTTGTGCAAAAGATGATTGAAAATTATGAAGCCCTGTTCATGGTTCCCCCAGA
TCTCCAGAACGAAGTGCTGATCAGCCTGTTAGAGACCGATCCTGATGTCGTGGACTATTTACTCAGAAGA
AAGGCTTCCCAATCATCAAGCCCTGACATGCTGCAGTCGGAAGTTTCCTTTTCCGTGGGAGGGAGGCATT
CATCTACAGACTCCAACAAGGCCTCCAGCGGAGACATCTCCCCTTATGACAACAACTCCCCAGTGCTGTC
TGAGCGCTCCCTGCTGGCTATGCAAGAGGACGCGGCCCCGGGGGGCTCGGAGAAGCTTTACAGAGTGCCA
GGGCAGTTTATGCTGGTGGGCCACTTGTCGTCGTCAAAGTCAAGGGAAAGTTCTCCTGGACCAAGGCTTG
GGAAAGATCTGTCAGAGGAGCCTTTCGATATCTGGGGAACTTGGCATTCAACATTAAAAAGCGGATCCAA
AGACCCAGGAATGACAGGTTCCTCTGGAGACATTTTTGAAAGCAGCTCCCTAAGAGCGGGGCCCTGCTCC
CTTTCTCAAGGGAACCTGTCCCCAAATTGGCCTCGGTGGCAGGGGAGCCCCGCAGAGCTGGACAGCGACA
CGCAGGGGGCTCGGAGGACTCAGGCCGCAGCCCCCGCGACGGAGGGCAGGGCCCACCCTGCGGTGTCGCG
CGCCTGCAGCACGCCCCACGTCCAGGTGGCAGGGAAAGCCGAGCGGCCCACGGCCAGGTCGGAGCAGTAC
TTGACCCTGAGCGGCGCCCACGACCTCAGCGAGAGTGAGCTGGATGTGGCCGGGCTGCAGAGCCGGGCCA
CACCTCAGTGCCAAAGACCCCATGGGAGTGGGAGGGATGACAAGCGGCCCCCGCCTCCATACCCGGGCCC
AGGGAAGCCCGCGGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAG
GGAGGCCAAGCAGCCGAGCGAGAGCAGCAGGTCACGCAGAAAAAACTGAGCAGCGCCAACTCCCTGCCAG
CGGGCGAGCAGGACAGTCCGCGCCTGGGGGACGCTGGCTGGCTCGACTGGCAGAGAGAGCGCTGGCAGAT
CTGGGAGCTCCTGTCGACCGACAACCCCGATGCCCTGCCCGAGACGCTGGTCTGA

Translation (974 aa):
MSAQSLLHSVFSCSSPASSSAASAKGFSKRKLRQTRSLDPALIGGCGSDEAGAEGSARGATAGRLYSPSL
PAESLGPRLASSSRGPPPRATRLPPPGPLCSSFSTPSTPQEKSPSGSFHFDYEVPLGRGGLKKSMAWDLP
SVLAGPASSRSASSILCSSGGGPNGIFASPRRWLQQRKFQSPPDSRGHPYVVWKSEGDFTWNSMSGRSVR
LRSVPIQSLSELERARLQEVAFYQLQQDCDLSCQITIPKDGQKRKKSLRKKLDSLGKEKNKDKEFIPQAF
GMPLSQVIANDRAYKLKQDLQRDEQKDASDFVASLLPFGNKRQNKELSSSNSSLSSTSETPNESTSPNTP
EPAPRARRRGAMSVDSITDLDDNQSRLLEALQLSLPAEAQSKKEKARDKKLSLNPIYRQVPRLVDSCCQH
LEKHGLQTVGIFRVGSSKKRVRQLREEFDRGIDVSLEEEHSVHDVAALLKEFLRDMPDPLLTRELYTAFI
NTLLLEPEEQLGTLQLLIYLLPPCNCDTLHRLLQFLSIVARHADDNISKDGQEVTGNKMTSLNLATIFGP
NLLHKQKSSDKEFSVQSSARAEESTAIIAVVQKMIENYEALFMVPPDLQNEVLISLLETDPDVVDYLLRR
KASQSSSPDMLQSEVSFSVGGRHSSTDSNKASSGDISPYDNNSPVLSERSLLAMQEDAAPGGSEKLYRVP
GQFMLVGHLSSSKSRESSPGPRLGKDLSEEPFDIWGTWHSTLKSGSKDPGMTGSSGDIFESSSLRAGPCS
LSQGNLSPNWPRWQGSPAELDSDTQGARRTQAAAPATEGRAHPAVSRACSTPHVQVAGKAERPTARSEQY
LTLSGAHDLSESELDVAGLQSRATPQCQRPHGSGRDDKRPPPPYPGPGKPAAAAAWIQGPPEGVETPTDQ
GGQAAEREQQVTQKKLSSANSLPAGEQDSPRLGDAGWLDWQRERWQIWELLSTDNPDALPETLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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