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Report for CCDS13955.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13955.1 Public Homo sapiens 22 NOL12 24 110 108 CCDS HistoryNCBI Gene:79159Re-query CCDS DB by CCDS ID:13955.1Re-query CCDS DB by GeneID:79159See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13955.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359114.9 ENSP00000352021.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000359114.9Link to Ensembl Protein Viewer:ENSP00000352021.4Re-query CCDS DB by Nucleotide ID:ENST00000359114Re-query CCDS DB by Protein ID:ENSP00000352021
Original member Current member EBI ENST00000438329.5 ENSP00000403059.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000438329.5Link to Ensembl Protein Viewer:ENSP00000403059.1Re-query CCDS DB by Nucleotide ID:ENST00000438329Re-query CCDS DB by Protein ID:ENSP00000403059
Original member Current member EBI ENST00000611699.1 ENSP00000482349.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611699.1Link to Ensembl Protein Viewer:ENSP00000482349.1Re-query CCDS DB by Nucleotide ID:ENST00000611699Re-query CCDS DB by Protein ID:ENSP00000482349
Original member Current member NCBI NM_024313.3 NP_077289.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024313.3Link to Protein Sequence:NP_077289.1Re-query CCDS DB by Nucleotide ID:NM_024313Re-query CCDS DB by Protein ID:NP_077289Link to BLAST:NP_077289.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_077289.1 213 Q9UGY1 213 100% 0 0

Chromosomal Locations for CCDS 13955.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 37686393 37686475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37687910 37688015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37688312 37688360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37688850 37688992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37690697 37690794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37691174 37691336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (642 nt):
ATGGGCCGCAACAAGAAGAAGAAGCGAGATGGTGACGACCGGCGGCCGAGGCTCGTTCTTAGCTTCGACG
AGGAGAAGAGGCGGGAGTACCTGACAGGCTTCCACAAGCGGAAGGTCGAGCGAAAGAAGGCAGCCATTGA
GGAGATTAAGCAGCGGCTGAAAGAGGAGCAGAGGAAGCTTCGGGAGGAGCGCCACCAGGAATACTTGAAG
ATGCTGGCAGAGAGAGAAGAGGCTCTGGAGGAGGCAGATGAGCTGGACCGGTTGGTGACAGCAAAGACGG
AGTCGGTGCAGTATGACCACCCCAACCACACAGTCACCGTGACCACCATCAGTGACCTGGACCTCTCGGG
GGCCCGGCTGCTCGGGCTGACCCCACCTGAGGGAGGGGCTGGAGACAGGTCTGAGGAGGAGGCGTCATCC
ACGGAGAAACCAACCAAAGCCTTGCCCAGGAAGTCCAGAGACCCCCTGCTCTCTCAGCGGATCTCCTCCC
TCACAGCATCACTACATGCACACAGCCGCAAAAAGGTCAAGAGGAAACATCCCCGACGGGCCCAGGACTC
CAAAAAGCCCCCAAGGGCCCCTCGTACCAGCAAGGCCCAGCGCCGCCGTCTCACAGGCAAAGCACGGCAC
AGCGGGGAGTGA

Translation (213 aa):
MGRNKKKKRDGDDRRPRLVLSFDEEKRREYLTGFHKRKVERKKAAIEEIKQRLKEEQRKLREERHQEYLK
MLAEREEALEEADELDRLVTAKTESVQYDHPNHTVTVTTISDLDLSGARLLGLTPPEGGAGDRSEEEASS
TEKPTKALPRKSRDPLLSQRISSLTASLHAHSRKKVKRKHPRRAQDSKKPPRAPRTSKAQRRRLTGKARH
SGE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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