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Report for CCDS13760.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13760.1 Public Homo sapiens 22 MRPL40 24 110 108 CCDS HistoryNCBI Gene:64976Re-query CCDS DB by CCDS ID:13760.1Re-query CCDS DB by GeneID:64976See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13760.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000333130.4 ENSP00000333401.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000333130.4Link to Ensembl Protein Viewer:ENSP00000333401.3Re-query CCDS DB by Nucleotide ID:ENST00000333130Re-query CCDS DB by Protein ID:ENSP00000333401
Original member Current member NCBI NM_003776.4 NP_003767.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003776.4Link to Protein Sequence:NP_003767.2Re-query CCDS DB by Nucleotide ID:NM_003776Re-query CCDS DB by Protein ID:NP_003767Link to BLAST:NP_003767.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003767.2 206 Q9NQ50 206 100% 0 0

Chromosomal Locations for CCDS 13760.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 19432555 19432607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 19433265 19433348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 19434736 19434894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 19435638 19435962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (621 nt):
ATGACGGCCTCCGTGCTGCGAAGTATCTCGCTAGCCCTGCGCCCGACTAGCGGGCTTCTGGGAACTTGGC
AGACGCAGCTTAGAGAGACTCACCAGCGAGCGTCATTGTTGTCTTTCTGGGAACTCATTCCCATGAGATC
AGAACCTCTTCGAAAAAAGAAGAAGGTAGATCCTAAAAAAGACCAAGAAGCAAAGGAGCGCTTGAAAAGG
AAGATCCGAAAACTGGAAAAGGCTACTCAAGAGCTAATTCCTATTGAAGATTTTATTACCCCTCTAAAGT
TCTTGGATAAAGCAAGAGAGCGGCCTCAGGTGGAGCTCACCTTTGAGGAGACTGAGAGGAGAGCTCTGCT
TCTGAAGAAGTGGTCCTTGTACAAGCAGCAAGAGCGTAAGATGGAGAGGGACACCATCAGGGCTATGCTA
GAAGCCCAGCAGGAAGCTCTGGAGGAACTGCAACTGGAATCCCCGAAGCTCCATGCTGAGGCCATCAAGC
GGGATCCTAACCTGTTCCCCTTTGAGAAGGAAGGGCCACATTACACACCACCGATCCCTAACTACCAACC
CCCTGAAGGCAGGTACAATGACATCACCAAGGTGTACACACAAGTGGAGTTTAAGAGATAG

Translation (206 aa):
MTASVLRSISLALRPTSGLLGTWQTQLRETHQRASLLSFWELIPMRSEPLRKKKKVDPKKDQEAKERLKR
KIRKLEKATQELIPIEDFITPLKFLDKARERPQVELTFEETERRALLLKKWSLYKQQERKMERDTIRAML
EAQQEALEELQLESPKLHAEAIKRDPNLFPFEKEGPHYTPPIPNYQPPEGRYNDITKVYTQVEFKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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