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Report for CCDS1319.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1319.1 Public Homo sapiens 1 ASTN1 24 110 108 CCDS HistoryNCBI Gene:460Re-query CCDS DB by CCDS ID:1319.1Re-query CCDS DB by GeneID:460See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1319.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361833.7 ENSP00000354536.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361833.7Link to Ensembl Protein Viewer:ENSP00000354536.2Re-query CCDS DB by Nucleotide ID:ENST00000361833Re-query CCDS DB by Protein ID:ENSP00000354536
Original member Current member NCBI NM_004319.3 NP_004310.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004319.3Link to Protein Sequence:NP_004310.1Re-query CCDS DB by Nucleotide ID:NM_004319Re-query CCDS DB by Protein ID:NP_004310Link to BLAST:NP_004310.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004310.1 1294 O14525-2 1294 100% 0 0

Chromosomal Locations for CCDS 1319.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 176864284 176864521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176868844 176869027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176876537 176876637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176882859 176882994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176884339 176884490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176888071 176888204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176894562 176894830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176934152 176934340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176936266 176936370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176943891 176944018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176945926 176946120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176949185 176949351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176957678 176957828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176958345 176958482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176965163 176965237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177014791 177014875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177023404 177023571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177024583 177024732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177029634 177029741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177030806 177030952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177032456 177032849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177061078 177061265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177164394 177164676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3885 nt):
ATGGCTTTAGCCGGGCTCTGCGCCCTGCTCGCCTGCTGCTGGGGGCCGGCGGCGGTGCTGGCCACGGCCG
CCGGCGACGTGGATCCATCCAAGGAGCTGGAGTGCAAGCTCAAAAGCATCACGGTGTCGGCACTGCCCTT
CCTGCGCGAGAACGACCTGAGCATCATGCACAGCCCCTCGGCCTCGGAGCCCAAGCTCCTCTTCTCGGTG
CGCAACGACTTCCCGGGAGAAATGGTCGTGGTGGACGACCTGGAGAACACGGAGCTGCCCTACTTCGTGC
TGGAGATCTCAGGGAACACAGAGGATATCCCTTTGGTGCGCTGGAGGCAGCAGTGGCTGGAGAATGGCAC
TTTGCTTTTTCACATTCATCACCAAGATGGTGCCCCAAGCCTTCCTGGACAAGACCCCACTGAAGAACCC
CAACATGAGTCGGCAGAAGAGGAGCTGAGGATCCTCCACATCTCAGTCATGGGTGGCATGATCGCTCTGC
TGCTGTCCATCTTGTGCCTGGTGATGATCCTGTATACTCGCCGGCGCTGGTGCAAACGCCGCCGGGTCCC
GCAGCCCCAGAAGAGTGCCAGTGCTGAGGCAGCCAATGAGATTCACTACATTCCTTCTGTGCTGATCGGC
GGGCACGGACGGGAGAGCCTGCGCAATGCCCGCGTGCAGGGCCACAACTCCAGTGGCACCCTGAGCATCC
GGGAGACACCTATCCTGGACGGCTATGAGTATGACATCACTGATCTGCGCCACCATCTGCAGAGGGAGTG
CATGAACGGAGGGGAGGACTTTGCCAGCCAGGTCACGCGCACCCTCGACTCCCTGCAGGGCTGCAATGAA
AAGTCGGGGATGGACCTCACACCAGGAAGTGACAATGCCAAGCTGTCACTGATGAACAAGTATAAAGATA
ATATTATAGCCACTAGCCCTGTGGACTCCAACCACCAGCAAGCCACCCTTCTCTCTCACACCTCCAGCAG
CCAGAGAAAGCGGATCAACAACAAAGCAAGAGCTGGTTCCGCCTTCTTGAACCCTGAAGGGGATTCTGGC
ACAGAGGCAGAAAACGACCCCCAGCTGACCTTTTACACGGATCCTTCAAGGAGCAGGAGGCGTAGTAGAG
TGGGTTCTCCCCGAAGTCCTGTGAATAAGACCACCTTGACCCTGATCAGCATCACCAGCTGTGTGATTGG
CCTCGTGTGCTCCTCTCACGTCAACTGCCCTCTCGTTGTCAAGATCACCCTGCATGTCCCTGAGCACCTG
ATTGCTGATGGGAGCCGCTTCATCTTGCTGGAGGGGAGCCAGCTGGATGCCAGTGACTGGCTGAACCCTG
CCCAAGTGGTTCTCTTCTCTCAGCAGAACTCCAGCGGACCCTGGGCCATGGACCTCTGTGCCCGGCGGCT
CCTGGACCCCTGTGAACACCAATGTGACCCCGAAACTGGGGAATGCCTCTGCTATGAAGGCTACATGAAG
GATCCAGTACATAAGCACCTTTGCATTCGGAACGAATGGGGGACAAACCAGGGGCCATGGCCTTACACAA
TATTTCAGCGAGGCTTTGACCTGGTTTTGGGAGAGCAGCCCTCTGATAAAATATTTAGATTCACCTACAC
TCTTGGGGAGGGCATGTGGTTGCCCCTCAGCAAGAGCTTTGTGATTCCACCAGCCGAACTGGCCATCAAT
CCATCAGCAAAGTGCAAGACGGACATGACTGTGATGGAGGATGCTGTGGAGGTCAGAGAGGAGCTGATGA
CTTCATCCTCCTTCGACAGCCTGGAGGTTCTCTTAGATTCCTTTGGGCCGGTGCGCGACTGCAGCAAAGA
TAACGGGGGCTGCAGTAAGAATTTCCGCTGTATTTCAGATCGCAAGCTGGACTCCACTGGTTGCGTGTGC
CCATCTGGACTCAGTCCCATGAAGGACAGCTCTGGCTGCTATGACCGCCACATCGGGGTGGACTGTTCCG
ACGGCTTCAACGGCGGCTGTGAGCAGCTGTGCCTCCAGCAGATGGCGCCCTTCCCGGACGACCCCACCTT
GTATAACATCCTCATGTTCTGTGGGTGCATCGAGGACTACAAGCTTGGTGTGGATGGACGCTCTTGCCAA
CTCATCACGGAGACCTGTCCAGAGGGAAGTGACTGTGGGGAAAGCAGGGAGCTTCCCATGAACCAGACCC
TCTTTGGGGAGATGTTCTTTGGTTACAACAACCATTCCAAGGAAGTGGCTGCCGGACAGGTGCTGAAAGG
AACATTCAGGCAAAACAACTTTGCTCGTGGTTTAGACCAGCAACTGCCAGATGGTCTTGTGGTGGCCACT
GTGCCCCTGGAGAATCAATGCCTAGAGGAGATCTCGGAGCCCACCCCTGACCCTGACTTCCTGACTGGGA
TGGTGAACTTCAGTGAAGTGTCTGGGTACCCTGTGCTGCAGCACTGGAAGGTCCGGTCTGTGATGTACCA
CATCAAACTCAACCAAGTGGCCATCTCTCAGGCCCTCAGCAATGCTCTCCACTCGCTGGATGGGGCTACA
TCTCGTGCAGATTTTGTGGCGCTGTTGGACCAGTTCGGCAACCATTACATCCAGGAAGCTATCTACGGCT
TTGAGGAGTCCTGTTCTATCTGGTACCCAAACAAGCAGGTCCAGCGGCGACTCTGGCTGGAGTATGAAGA
CATCAGTAAAGGCAACTCCCCATCAGATGAGTCTGAGGAGCGGGAAAGAGACCCCAAGGTGCTGACATTC
CCAGAATACATCACCAGCTTGTCAGACTCCGGCACCAAGCACATGGCGGCTGGAGTCCGCATGGAGTGCC
ACAGCAAGGGACGATGCCCCTCGTCCTGCCCCCTGTGTCATGTGACATCCAGCCCTGACACCCCTGCTGA
GCCGGTTCTGCTGGAGGTGACCAAAGCAGCCCCCATCTATGAACTAGTGACCAACAACCAGACCCAGAGG
CTCTTGCAGGAGGCTACCATGAGCTCTCTCTGGTGCTCAGGGACTGGAGATGTCATCGAGGACTGGTGTC
GATGTGACTCCACTGCTTTTGGAGCTGATGGACTCCCCACCTGTGCGCCTCTCCCACAGCCTGTGCTGAG
ACTCTCCACGGTTCACGAGCCCAGCAGCACTCTTGTGGTCCTGGAGTGGGAACACTCAGAGCCACCAATC
GGGGTGCAGATTGTAGATTACCTCCTCCGTCAAGAGAAAGTCACTGACAGGATGGACCACTCCAAAGTGG
AGACAGAAACAGTGCTGAGCTTTGTGGACGACATCATCTCTGGAGCAAAGTCTCCTTGTGCAATGCCATC
TCAGGTGCCGGACAAGCAGCTCACCACCATCTCTCTGATCATACGATGCCTGGAACCTGACACCATTTAC
ATGTTCACGCTGTGGGGAGTGGACAACACAGGACGGCGCTCCAGGCCAAGCGACGTGATCGTGAAGACCC
CATGCCCCGTGGTGGATGATGTCAAGGCTCAAGAAATAGCAGACAAGATCTACAATCTCTTCAATGGCTA
CACTAGTGGGAAGGAGCAGCAGACCGCCTACAACACCCTCCTGGATCTGGGTTCCCCCACCTTACACCGG
GTCCTCTACCACTATAACCAGCACTATGAGAGTTTTGGGGAATTCACCTGGCGATGTGAGGATGAGTTAG
GTCCCAGGAAAGCTGGTCTCATCCTTTCCCAGCTTGGGGACCTCAGCAGTTGGTGCAATGGACTCCTTCA
GGAACCCAAGATAAGCTTGCGGCGCAGCTCACTCAAGTACCTGGGGTGCCGCTACAGCGAGATCAAACCC
TACGGACTTGACTGGGCGGAGCTCAGCCGGGACCTCAGGAAGACGTGTGAGGAGCAGACCCTGAGTATCC
CCTACAACGACTATGGGGACAGCAAAGAGATCTAG

Translation (1294 aa):
MALAGLCALLACCWGPAAVLATAAGDVDPSKELECKLKSITVSALPFLRENDLSIMHSPSASEPKLLFSV
RNDFPGEMVVVDDLENTELPYFVLEISGNTEDIPLVRWRQQWLENGTLLFHIHHQDGAPSLPGQDPTEEP
QHESAEEELRILHISVMGGMIALLLSILCLVMILYTRRRWCKRRRVPQPQKSASAEAANEIHYIPSVLIG
GHGRESLRNARVQGHNSSGTLSIRETPILDGYEYDITDLRHHLQRECMNGGEDFASQVTRTLDSLQGCNE
KSGMDLTPGSDNAKLSLMNKYKDNIIATSPVDSNHQQATLLSHTSSSQRKRINNKARAGSAFLNPEGDSG
TEAENDPQLTFYTDPSRSRRRSRVGSPRSPVNKTTLTLISITSCVIGLVCSSHVNCPLVVKITLHVPEHL
IADGSRFILLEGSQLDASDWLNPAQVVLFSQQNSSGPWAMDLCARRLLDPCEHQCDPETGECLCYEGYMK
DPVHKHLCIRNEWGTNQGPWPYTIFQRGFDLVLGEQPSDKIFRFTYTLGEGMWLPLSKSFVIPPAELAIN
PSAKCKTDMTVMEDAVEVREELMTSSSFDSLEVLLDSFGPVRDCSKDNGGCSKNFRCISDRKLDSTGCVC
PSGLSPMKDSSGCYDRHIGVDCSDGFNGGCEQLCLQQMAPFPDDPTLYNILMFCGCIEDYKLGVDGRSCQ
LITETCPEGSDCGESRELPMNQTLFGEMFFGYNNHSKEVAAGQVLKGTFRQNNFARGLDQQLPDGLVVAT
VPLENQCLEEISEPTPDPDFLTGMVNFSEVSGYPVLQHWKVRSVMYHIKLNQVAISQALSNALHSLDGAT
SRADFVALLDQFGNHYIQEAIYGFEESCSIWYPNKQVQRRLWLEYEDISKGNSPSDESEERERDPKVLTF
PEYITSLSDSGTKHMAAGVRMECHSKGRCPSSCPLCHVTSSPDTPAEPVLLEVTKAAPIYELVTNNQTQR
LLQEATMSSLWCSGTGDVIEDWCRCDSTAFGADGLPTCAPLPQPVLRLSTVHEPSSTLVVLEWEHSEPPI
GVQIVDYLLRQEKVTDRMDHSKVETETVLSFVDDIISGAKSPCAMPSQVPDKQLTTISLIIRCLEPDTIY
MFTLWGVDNTGRRSRPSDVIVKTPCPVVDDVKAQEIADKIYNLFNGYTSGKEQQTAYNTLLDLGSPTLHR
VLYHYNQHYESFGEFTWRCEDELGPRKAGLILSQLGDLSSWCNGLLQEPKISLRRSSLKYLGCRYSEIKP
YGLDWAELSRDLRKTCEEQTLSIPYNDYGDSKEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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